Department of Biology, Ecology and Earth Sciences, University of Calabria, 87036 Rende, Italy.
Biological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal 23952, Saudi Arabia.
Int J Mol Sci. 2023 Jan 23;24(3):2254. doi: 10.3390/ijms24032254.
The prediction of chronological age from methylation-based biomarkers represents one of the most promising applications in the field of forensic sciences. Age-prediction models developed so far are not easily applicable for forensic caseworkers. Among the several attempts to pursue this objective, the formulation of single-locus models might represent a good strategy. The present work aimed to develop an accurate single-locus model for age prediction exploiting , a gene for which epigenetic alterations are most highly correlated with age. We carried out a systematic review of different published pyrosequencing datasets in which methylation of the promoter was analysed to formulate age prediction models. Nine of these, with available datasets involving 2298 participants, were selected. We found that irrespective of which model was adopted, a very strong relationship between methylation levels and age exists. In particular, the model giving the best age-prediction accuracy was the gradient boosting regressor with a prediction error of about 5.5 years. The findings reported here strongly support the use of for the formulation of a single-locus epigenetic model, but the inclusion of additional, non-redundant markers is a fundamental requirement to apply a molecular model to forensic applications with more robust results.
基于甲基化的生物标志物预测年龄是法医学领域最有前途的应用之一。迄今为止开发的年龄预测模型对于法医工作者来说并不容易应用。在追求这一目标的几种尝试中,单基因座模型的制定可能是一种很好的策略。本研究旨在开发一种利用 基因的准确单基因座模型来进行年龄预测,该基因的表观遗传改变与年龄相关性最高。我们对不同已发表的焦磷酸测序数据集进行了系统综述,这些数据集分析了 启动子的甲基化,以制定年龄预测模型。其中 9 个数据集涉及 2298 名参与者,被选入研究。我们发现,无论采用哪种模型, 甲基化水平与年龄之间存在很强的相关性。特别是,梯度提升回归器给出了最佳的年龄预测精度,预测误差约为 5.5 年。本研究结果强烈支持将 用于制定单基因座表观遗传模型,但纳入额外的非冗余标记是将分子模型应用于法医应用以获得更稳健结果的基本要求。