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观赏羽衣甘蓝(L. var. )内叶转红过程中花色苷积累相关关键基因的研究

Investigation of the Key Genes Associated with Anthocyanin Accumulation during Inner Leaf Reddening in Ornamental Kale ( L. var. ).

机构信息

Liaoning Key Laboratory of Genetics and Breeding for Cruciferous Vegetable Crops, College of Horticulture, Shenyang Agricultural University, Shenyang 110065, China.

出版信息

Int J Mol Sci. 2023 Feb 2;24(3):2837. doi: 10.3390/ijms24032837.

Abstract

Ornamental kale ( L. var. ) is a popular decorative plant in late autumn and winter. However, only during low-temperature color-changed periods below rough 15 °C can the plant accumulate anthocyanins and exhibit a diverse array of foliar color patterns. In this study, we probed into the potential mechanism of inner leaf reddening in a red-leaf pure line of ornamental kale by physiological, metabolic, and transcriptomic analyses. Determination of anthocyanin contents in the uncolored new white leaves (S0), the light red leaves (S1) in the reddening period and the red leaves (S2) completing color change, and analysis of anthocyanin metabolites at stage S2, revealed that the coloring of red leaves was mainly attributed to the accumulation of cyanidins. We further used transcriptomic sequencing between the pairwise S0, S1, and S2 stages to identify 21 differentially expressed genes (DEGs) involved in anthocyanin biosynthesis, among which the expression level of 14 DEGs was positively correlated with anthocyanin accumulation, and 6 DEGs were negatively correlated with anthocyanin accumulation. A total of 89 co-expressed genes were screened out, from which three DEGs (, , and ) were identified as hub genes in co-expression DEGs network. and were the DEGs with the highest expressions at S2. Moreover, two co-expressed DEGs related to stress response ( and ) also exhibited upregulated expressions and positive correlations with anthocyanin accumulation. A deep dive into the underlying regulatory network of anthocyanin accumulation comprising these six upregulated DEGs from S0 to S2 was performed via trend, correlation, and differentially co-expression analysis. This study uncovered the DEGs expression profiles associated with anthocyanin accumulation during ornamental kale inner leaf reddening, which provided a basis for further dissecting the molecular mechanisms of leaf color characteristic change in ornamental kale at low temperatures.

摘要

观赏甘蓝(L. var.)是晚秋和初冬流行的装饰性植物。然而,只有在 15°C 以下的低温变色期,植物才能积累花青素,并表现出多种多样的叶片颜色模式。在这项研究中,我们通过生理、代谢和转录组分析探究了观赏甘蓝红叶纯系内叶变红的潜在机制。测定未着色的新白叶(S0)、变色期浅红叶(S1)和完成变色的红叶(S2)中的花青素含量,以及 S2 期花青素代谢物的分析表明,红叶的着色主要归因于飞燕草素的积累。我们进一步使用 S0、S1 和 S2 阶段之间的转录组测序来鉴定 21 个参与花青素生物合成的差异表达基因(DEGs),其中 14 个 DEG 的表达水平与花青素积累呈正相关,6 个 DEG 与花青素积累呈负相关。共筛选出 89 个共表达基因,其中 3 个 DEG(、和)被鉴定为共表达 DEGs 网络中的枢纽基因。和在 S2 时表达水平最高。此外,两个与应激反应相关的共表达 DEGs(和)也表现出上调表达,并与花青素积累呈正相关。通过趋势、相关性和差异共表达分析,对 S0 到 S2 期间这六个上调 DEG 组成的花青素积累的潜在调控网络进行了深入研究。本研究揭示了观赏甘蓝内叶变红过程中与花青素积累相关的 DEGs 表达谱,为进一步解析观赏甘蓝低温下叶片颜色特征变化的分子机制提供了依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d95/9917897/4def68cba932/ijms-24-02837-g001.jpg

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