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本文引用的文献

1
Common bacterial blight of bean: a model of seed transmission and pathological convergence.菜豆普通细菌性疫病：种子传播与病理趋同的模型。
Mol Plant Pathol. 2021 Dec;22(12):1464-1480. doi: 10.1111/mpp.13067. Epub 2021 May 4.
2
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
3
Horizontal gene transfer plays a major role in the pathological convergence of Xanthomonas lineages on common bean.水平基因转移在黄单胞菌属共同作用于菜豆的病理趋同中起着主要作用。
BMC Genomics. 2018 Aug 13;19(1):606. doi: 10.1186/s12864-018-4975-4.
4
Xanthomonas adaptation to common bean is associated with horizontal transfers of genes encoding TAL effectors.黄单胞菌对普通菜豆的适应性与编码TAL效应子的基因水平转移有关。
BMC Genomics. 2017 Aug 30;18(1):670. doi: 10.1186/s12864-017-4087-6.
5
Beans ( ssp.) as a Model for Understanding Crop Evolution.作为理解作物进化模型的菜豆（亚种）
Front Plant Sci. 2017 May 8;8:722. doi: 10.3389/fpls.2017.00722. eCollection 2017.
6
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
7
Circlator: automated circularization of genome assemblies using long sequencing reads.Circlator：利用长测序读段实现基因组组装的自动化环化
Genome Biol. 2015 Dec 29;16:294. doi: 10.1186/s13059-015-0849-0.
8
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM：评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
9
Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads.野油菜黄单胞菌野油菜黄单胞菌亚种4834-R的基因组序列表明，鞭毛运动并非黄单胞菌的普遍特征。
BMC Genomics. 2013 Nov 6;14:761. doi: 10.1186/1471-2164-14-761.
10
A multilocus sequence analysis of the genus Xanthomonas.黄单胞菌属的多位点序列分析。
Syst Appl Microbiol. 2008 Oct;31(5):366-77. doi: 10.1016/j.syapm.2008.06.004. Epub 2008 Sep 10.

九株引发菜豆普通细菌性疫病的菌株的全基因组序列

Whole Genome Sequences of Nine Strains Responsible for Common Bacterial Blight of Bean.

作者信息

Gaudin Charlotte, Gihaut Christopher, Briand Martial, Marques Abi S A, Ferreira Marisa A S V, Jacques Marie-Agnès, Chen Nicolas W G

机构信息

Université Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, Angers, France.

Plant Quarantine Station, Embrapa Recursos Genéticos e Biotecnologia, Brasília, Brazil.

出版信息

Microbiol Resour Announc. 2023 Mar 16;12(3):e0125922. doi: 10.1128/mra.01259-22. Epub 2023 Feb 13.

DOI:10.1128/mra.01259-22
PMID:36779735
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10019307/
Abstract

We report the complete and circularized genome sequences of nine strains of Xanthomonas phaseoli pv. phaseoli and Xanthomonas citri pv. fuscans, which cause common bacterial blight of bean. These assemblies provide high-quality material for functional and evolutionary studies of these legume pathogens.

摘要

我们报告了九株菜豆黄单胞菌菜豆致病变种和柑橘黄单胞菌香蕉致病变种的完整环状基因组序列，它们会引发菜豆的普通细菌性疫病。这些基因组组装为这些豆科植物病原体的功能和进化研究提供了高质量的材料。