Fisher Karl J, Kinsey Robert, Mohamath Raodoh, Phan Tony, Liang Hong, Orr Mark T, Lykins William R, Guderian Jeffrey A, Bakken Julie, Argilla David, Ramer-Denisoff Gabi, Larson Elise, Qi Yizhi, Sivananthan Sandra, Smolyar Karina, Carter Darrick, Paddon Christopher J, Fox Christopher B
Amyris, Inc., Emeryville, CA, USA.
Access to Advanced Health Institute, formerly Infectious Disease Research Institute, Seattle, WA, USA.
NPJ Vaccines. 2023 Feb 16;8(1):14. doi: 10.1038/s41541-023-00608-y.
Synthetic biology has allowed for the industrial production of supply-limited sesquiterpenoids such as the antimalarial drug artemisinin and β-farnesene. One of the only unmodified animal products used in medicine is squalene, a triterpenoid derived from shark liver oil, which when formulated into an emulsion is used as a vaccine adjuvant to enhance immune responses in licensed vaccines. However, overfishing is depleting deep-sea shark populations, leading to potential supply problems for squalene. We chemically generated over 20 squalene analogues from fermentation-derived β-farnesene and evaluated adjuvant activity of the emulsified compounds compared to shark squalene emulsion. By employing a desirability function approach that incorporated multiple immune readouts, we identified analogues with enhanced, equivalent, or decreased adjuvant activity compared to shark squalene emulsion. Availability of a library of structurally related analogues allowed elucidation of structure-function relationships. Thus, combining industrial synthetic biology with chemistry and immunology enabled generation of sustainable terpenoid-based vaccine adjuvants comparable to current shark squalene-based adjuvants while illuminating structural properties important for adjuvant activity.
合成生物学已实现了供应受限的倍半萜类化合物的工业化生产,如抗疟药物青蒿素和β-法尼烯。鲨烯是医学中使用的仅有的未改性动物产品之一,它是一种源自鲨鱼肝油的三萜类化合物,当制成乳剂时,可用作疫苗佐剂,以增强已获许可疫苗的免疫反应。然而,过度捕捞正导致深海鲨鱼种群数量减少,从而引发鲨烯潜在的供应问题。我们利用发酵产生的β-法尼烯通过化学方法合成了20多种鲨烯类似物,并将乳化后的化合物与鲨鱼鲨烯乳剂的佐剂活性进行了比较。通过采用纳入多种免疫读数的合意函数方法,我们鉴定出了与鲨鱼鲨烯乳剂相比佐剂活性增强、相当或降低的类似物。结构相关类似物文库的可得性使得结构-功能关系得以阐明。因此,将工业合成生物学与化学和免疫学相结合,能够生成与目前基于鲨鱼鲨烯的佐剂相当的可持续的基于萜类化合物的疫苗佐剂,同时阐明对佐剂活性至关重要的结构特性。