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确定性过程塑造饮用水中丰富和稀有的细菌群落。

Deterministic Processes Shape Abundant and Rare Bacterial Communities in Drinking Water.

作者信息

Han Binghua, Yu Qiaoling, Su Wanghong, Yang Jiawei, Zhang Shiheng, Li Xiaoshan, Li Huan

机构信息

School of Public Health, Institute of Occupational and Environmental Health, Lanzhou University, Lanzhou, 730000, China.

Chongqing Key Laboratory of Development and Utilization of Genuine Medicinal Materials in Three Gorges Reservoir Area, Faculty of Basic Medical Sciences, Chongqing Three Gorges Medical College, Wanzhou, 404120, China.

出版信息

Curr Microbiol. 2023 Feb 20;80(4):111. doi: 10.1007/s00284-023-03210-6.

Abstract

The deep mechanisms shaping bacterial assembly are a crucial challenge in drinking water ecosystem. However, much less is known about seasonal diversity distributions and assembly mechanisms of abundant and rare bacteria in drinking water. The combination of environmental variables and high-throughput 16S rRNA gene sequencing was conducted to examine the composition, assembly, co-occurrence patterns of abundant and rare bacteria from five drinking water sites across four seasons in one year in China. The results indicated that abundant taxa were mainly composed of Rhizobiales_UG1, Sphingomonadales_UG1, and Comamonadaceae, while rare taxa were Sphingomonadales_UG1, Rhizobiales_UG2, and Rhizobiales_UG1. The richness of rare bacteria was greater than that of abundant ones, and the richness had no differences among seasons. The beta diversity was significantly discrepant in abundant and rare communities and among seasons. Deterministic mechanism accounted for a larger contribution to abundant taxa than rare taxa. Furthermore, water temperature had higher effects on abundant microbiome than rare ones. Co-occurrence network analysis indicated that abundant taxa that occupied frequently in central positions had stronger effect on co-occurrence network. In our study, these results collectively suggested that rare bacteria respond to environmental variables with an analogical pattern to abundant counterparts (similar community assembly), but their ecological diversities, driving forces, and co-occurrence patterns were not equivalent in drinking water.

摘要

塑造细菌群落结构的深层机制是饮用水生态系统面临的一项关键挑战。然而,关于饮用水中优势菌和稀有菌的季节多样性分布及群落构建机制,我们所知甚少。本研究结合环境变量与高通量16S rRNA基因测序技术,对中国某地区一年内四个季节中五个饮用水位点的优势菌和稀有菌的组成、群落构建及共现模式进行了研究。结果表明,优势菌主要由根瘤菌目UG1、鞘脂单胞菌目UG1和丛毛单胞菌科组成,而稀有菌则为鞘脂单胞菌目UG1、根瘤菌目UG2和根瘤菌目UG1。稀有菌的丰富度高于优势菌,且各季节间丰富度无差异。优势菌和稀有菌群落以及不同季节间的β多样性存在显著差异。确定性过程对优势菌的贡献大于稀有菌。此外,水温对优势微生物群落的影响大于稀有微生物群落。共现网络分析表明,在共现网络中频繁占据中心位置的优势菌对网络的影响更强。在本研究中,这些结果共同表明,稀有菌对环境变量的响应模式与优势菌类似(群落构建相似),但在饮用水中,它们的生态多样性、驱动因素和共现模式并不相同。

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