School of Earth & Ocean Sciences, University of Victoria, P.O. Box 1700 Station CSC, Victoria, BC, V8W 2Y2, Canada.
Department of Biology, University of Victoria, P.O. Box 1700 CSC, Victoria, BC, V8W 2Y2, Canada.
Commun Biol. 2023 Feb 23;6(1):212. doi: 10.1038/s42003-023-04597-5.
The mechanisms by which large-scale microbial community function emerges from complex ecological interactions between individual taxa and functional groups remain obscure. We leveraged network analyses of 16S rRNA amplicon sequences obtained over a seven-month timeseries in seasonally anoxic Saanich Inlet (Vancouver Island, Canada) to investigate relationships between microbial community structure and water column NO cycling. Taxa separately broadly into three discrete subnetworks with contrasting environmental distributions. Oxycline subnetworks were structured around keystone aerobic heterotrophs that correlated with nitrification rates and NO supersaturations, linking NO production and accumulation to taxa involved in organic matter remineralization. Keystone taxa implicated in anaerobic carbon, nitrogen, and sulfur cycling in anoxic environments clustered together in a low-oxygen subnetwork that correlated positively with nitrification NO yields and NO production from denitrification. Close coupling between NO producers and consumers in the anoxic basin is indicated by strong correlations between the low-oxygen subnetwork, PICRUSt2-predicted nitrous oxide reductase (nosZ) gene abundances, and NO undersaturation. This study implicates keystone taxa affiliated with common ODZ groups as a potential control on water column NO cycling and provides a theoretical basis for further investigations into marine microbial interaction networks.
大型微生物群落功能是如何从个体分类群和功能群之间复杂的生态相互作用中产生的,其机制仍不清楚。我们利用在季节性缺氧的萨尼奇湾(加拿大温哥华岛)七个月时间序列中获得的 16S rRNA 扩增子序列的网络分析,研究微生物群落结构与水柱 NO 循环之间的关系。分类群分别广泛分为三个具有不同环境分布的离散子网。氧化层子网围绕关键需氧异养生物构建,这些生物与硝化速率和 NO 过饱和度相关,将 NO 的产生和积累与参与有机物再矿化的分类群联系起来。在缺氧环境中涉及厌氧碳、氮和硫循环的关键类群聚集在一个低氧子网中,该子网与硝化 NO 产率和反硝化产生的 NO 呈正相关。在缺氧盆地中,NO 生产者和消费者之间的紧密耦合由低氧子网、PICRUSt2 预测的氧化亚氮还原酶(nosZ)基因丰度与 NO 不饱和之间的强相关性表明。本研究将与常见海洋贫营养区(ODZ)群体相关的关键类群作为水柱 NO 循环的潜在控制因素,并为进一步研究海洋微生物相互作用网络提供了理论基础。