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多基因全基因组分析鉴定原发性硬化性胆管炎的新易感位点和候选药物。

Multitrait genome-wide analyses identify new susceptibility loci and candidate drugs to primary sclerosing cholangitis.

机构信息

Institute for Clinical and Translational Research, Baylor College of Medicine, Houston, TX, USA.

Section of Epidemiology and Population Sciences, Department of Medicine, Baylor College of Medicine, Houston, TX, USA.

出版信息

Nat Commun. 2023 Feb 24;14(1):1069. doi: 10.1038/s41467-023-36678-8.

Abstract

Primary sclerosing cholangitis (PSC) is a rare autoimmune bile duct disease that is strongly associated with immune-mediated disorders. In this study, we implemented multitrait joint analyses to genome-wide association summary statistics of PSC and numerous clinical and epidemiological traits to estimate the genetic contribution of each trait and genetic correlations between traits and to identify new lead PSC risk-associated loci. We identified seven new loci that have not been previously reported and one new independent lead variant in the previously reported locus. Functional annotation and fine-mapping nominated several potential susceptibility genes such as MANBA and IRF5. Network-based in silico drug efficacy screening provided candidate agents for further study of pharmacological effect in PSC.

摘要

原发性硬化性胆管炎(PSC)是一种罕见的自身免疫性胆管疾病,与免疫介导的疾病密切相关。在这项研究中,我们实施了多性状联合分析,对 PSC 的全基因组关联汇总统计数据和众多临床及流行病学特征进行分析,以估计每个特征的遗传贡献以及特征之间的遗传相关性,并确定新的 PSC 风险相关的位点。我们鉴定了七个以前未报道过的新位点和一个以前报道过的位点中的一个新的独立的主要变异。功能注释和精细映射提名了几个潜在的易感基因,如 MANBA 和 IRF5。基于网络的药物疗效筛选为进一步研究 PSC 中的药物作用提供了候选药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ca8/9958016/912eb61a5d49/41467_2023_36678_Fig1_HTML.jpg

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