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癌症的代谢表观遗传学的热力学方法。

A Thermodynamic Approach to the Metaboloepigenetics of Cancer.

机构信息

Dipartimento Energia "Galileo Ferraris", Politecnico di Torino, Corso Duca degli Abruzzi 24, 10129 Torino, Italy.

Department of Radiology, Harvard-MIT Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Charlestown, Boston, MA 02129, USA.

出版信息

Int J Mol Sci. 2023 Feb 7;24(4):3337. doi: 10.3390/ijms24043337.

DOI:10.3390/ijms24043337
PMID:36834748
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9960652/
Abstract

We present a novel thermodynamic approach to the epigenomics of cancer metabolism. Here, any change in a cancer cell's membrane electric potential is completely irreversible, and as such, cells must consume metabolites to reverse the potential whenever required to maintain cell activity, a process driven by ion fluxes. Moreover, the link between cell proliferation and the membrane's electric potential is for the first time analytically proven using a thermodynamic approach, highlighting how its control is related to inflow and outflow of ions; consequently, a close interaction between environment and cell activity emerges. Lastly, we illustrate the concept by evaluating the Fe2+-flux in the presence of carcinogenesis-promoting mutations of the TET1/2/3 gene family.

摘要

我们提出了一种新的热力学方法来研究癌症代谢的表观基因组学。在这里,癌细胞膜电势的任何变化都是完全不可逆的,因此,细胞必须消耗代谢物来逆转电势,只要需要维持细胞活动,这个过程是由离子流驱动的。此外,细胞增殖与膜电势之间的联系首次通过热力学方法得到了分析证明,这突出了其控制与离子的流入和流出之间的关系;因此,环境与细胞活动之间出现了密切的相互作用。最后,我们通过评估 TET1/2/3 基因家族致癌突变存在时的 Fe2+通量来说明这一概念。

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2
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本文引用的文献

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Iron Metabolism in the Tumor Microenvironment-Implications for Anti-Cancer Immune Response.肿瘤微环境中的铁代谢-对抗肿瘤免疫反应的影响。
Cells. 2021 Feb 2;10(2):303. doi: 10.3390/cells10020303.
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Roles and Regulations of TET Enzymes in Solid Tumors.TET 酶在实体瘤中的作用与调控机制。
Trends Cancer. 2021 Jul;7(7):635-646. doi: 10.1016/j.trecan.2020.12.011. Epub 2021 Jan 16.
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How Life Works-A Continuous Seebeck-Peltier Transition in Cell Membrane?生命如何运作——细胞膜中塞贝克-珀尔帖效应的连续转变?
Entropy (Basel). 2020 Aug 30;22(9):960. doi: 10.3390/e22090960.
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Thermal Resonance and Cell Behavior.热共振与细胞行为。
Entropy (Basel). 2020 Jul 16;22(7):774. doi: 10.3390/e22070774.
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Tet2 at the interface between cancer and immunity.Tet2 在癌症与免疫的交界处。
Commun Biol. 2020 Nov 12;3(1):667. doi: 10.1038/s42003-020-01391-5.
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Iron overload: Effects on cellular biochemistry.铁过载:对细胞生物化学的影响。
Clin Chim Acta. 2020 May;504:180-189. doi: 10.1016/j.cca.2019.11.029. Epub 2019 Nov 29.
7
Thermodynamic properties of microorganisms: determination and analysis of enthalpy, entropy, and Gibbs free energy of biomass, cells and colonies of 32 microorganism species.微生物的热力学性质:32种微生物物种的生物质、细胞和菌落的焓、熵和吉布斯自由能的测定与分析
Heliyon. 2019 Jun 18;5(6):e01950. doi: 10.1016/j.heliyon.2019.e01950. eCollection 2019 Jun.
8
Constructal law analysis of Cl transport in eyes aqueous humor.构建法分析眼睛房水中 Cl 转运
Sci Rep. 2017 Jul 31;7(1):6856. doi: 10.1038/s41598-017-07357-8.
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Second law efficiency for living cells.活细胞的第二定律效率。
Front Biosci (Schol Ed). 2017 Jun 1;9(2):270-275. doi: 10.2741/s487.
10
Epigenetics: The origins and evolution of a fashionable topic.表观遗传学:一个热门话题的起源与演变
Dev Biol. 2016 Aug 1;416(1):249-254. doi: 10.1016/j.ydbio.2016.06.005. Epub 2016 Jun 9.