• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于分子的亚洲三种主要飞虱(半翅目:飞虱科)物种鉴定方法的建立及分子诊断反应条件的优化

Development of Molecular-Based Species Identification and Optimization of Reaction Conditions for Molecular Diagnosis of Three Major Asian Planthoppers (Hemiptera: Delphacidae).

作者信息

Rahman Md-Mafizur, Nam Hwayeun, Choi Nakjung, Kim Juil

机构信息

Agriculture and Life Sciences Research Institute, Kangwon National University, Chuncheon 24341, Republic of Korea.

Department of Biotechnology and Genetic Engineering, Faculty of Biological Science, Islamic University, Kushtia 7003, Bangladesh.

出版信息

Insects. 2023 Jan 25;14(2):124. doi: 10.3390/insects14020124.

DOI:10.3390/insects14020124
PMID:36835693
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9962309/
Abstract

Asian planthoppers (Hemiptera: Delphacidae) that include brown planthoppers (BPH, , Stål), white-backed planthoppers (WBPH, , Horváth), and small brown planthoppers (SBPH, , Fallén) are the primary sucking-type pests of rice. These three insects share morphological and sequence similarities. As insecticide resistance patterns and control strategies vary according to species, the accurate discrimination of these species is important. Here, we developed six species-specific primers based on partial mitochondrial genome sequences. The primers were successfully used in multiplex PCR, loop-mediated isothermal amplification (LAMP) assays, and conventional PCR. Here, we used genomic DNA obtained using the DNA-releasing technique (tissue samples were incubated at 95 °C for 5 min with 30 μL nuclease-free water, and the supernatant was used). We showed that multiplex PCR could analyze the density of each species following a mass collection in the field; the LAMP assay can diagnose the species within 40 min; conventional PCR can be widely applied to a large number of field samples, as well as individuals or mass collections. In conclusion, these results demonstrate the potential of the species-specific primers and DNA-releasing technique for accurate multiplex PCR and LAMP assays, which may assist the intensive field monitoring of integrated management of these species.

摘要

包括褐飞虱(Nilaparvata lugens,Stål)、白背飞虱(Sogatella furcifera,Horváth)和灰飞虱(Laodelphax striatellus,Fallén)在内的亚洲飞虱(半翅目:飞虱科)是水稻的主要刺吸式害虫。这三种昆虫在形态和序列上具有相似性。由于杀虫剂抗性模式和防治策略因物种而异,准确鉴别这些物种很重要。在此,我们基于部分线粒体基因组序列开发了六种物种特异性引物。这些引物成功应用于多重PCR、环介导等温扩增(LAMP)检测和常规PCR。在此,我们使用了通过DNA释放技术获得的基因组DNA(将组织样本与30 μL无核酸酶水在95 °C孵育5分钟,取上清液)。我们表明,多重PCR可以在田间大量采集后分析每个物种的密度;LAMP检测可以在40分钟内诊断出物种;常规PCR可以广泛应用于大量田间样本以及个体或大量采集样本。总之,这些结果证明了物种特异性引物和DNA释放技术在准确的多重PCR和LAMP检测中的潜力,这可能有助于对这些物种的综合管理进行密集的田间监测。

相似文献

1
Development of Molecular-Based Species Identification and Optimization of Reaction Conditions for Molecular Diagnosis of Three Major Asian Planthoppers (Hemiptera: Delphacidae).基于分子的亚洲三种主要飞虱(半翅目:飞虱科)物种鉴定方法的建立及分子诊断反应条件的优化
Insects. 2023 Jan 25;14(2):124. doi: 10.3390/insects14020124.
2
The complete mitochondrial genome sequence of Sogatella furcifera (Horváth) and a comparative mitogenomic analysis of three predominant rice planthoppers.褐飞虱(Horváth)的完整线粒体基因组序列及其三种主要稻飞虱的比较线粒体基因组分析。
Gene. 2014 Jan 1;533(1):100-9. doi: 10.1016/j.gene.2013.09.117. Epub 2013 Oct 8.
3
A rapid multiplex PCR assay for species identification of Asian rice planthoppers (Hemiptera: Delphacidae) and its application to early-instar nymphs in paddy fields.一种用于亚洲稻飞虱(半翅目:飞虱科)物种鉴定的快速多重PCR检测方法及其在稻田低龄若虫中的应用。
PLoS One. 2021 Apr 23;16(4):e0250471. doi: 10.1371/journal.pone.0250471. eCollection 2021.
4
Development and preliminary application of a triplex real-time polymerase chain reaction assay for evaluating predation on three planthoppers in a rice ecosystem.三重实时聚合酶链反应检测法的开发与初步应用,用于评估稻田生态系统中三种飞虱的捕食情况。
Mol Ecol Resour. 2013 Sep;13(5):811-9. doi: 10.1111/1755-0998.12127. Epub 2013 May 27.
5
Mitochondrial cox sequences of Nilaparvata lugens and Sogatella furcifera (Hemiptera, Delphacidae): low specificity among Asian planthopper populations.褐飞虱和白背飞虱(半翅目,飞虱科)的线粒体细胞色素c氧化酶亚基序列:亚洲飞虱种群间特异性较低
Bull Entomol Res. 2013 Aug;103(4):382-92. doi: 10.1017/S000748531200082X. Epub 2013 Mar 28.
6
The complete mitochondrial genomes of two rice planthoppers, Nilaparvata lugens and Laodelphax striatellus: conserved genome rearrangement in Delphacidae and discovery of new characteristics of atp8 and tRNA genes.两种飞虱(褐飞虱和白背飞虱)的完整线粒体基因组:半翅目昆虫中保守的基因组重排及 ATP8 和 tRNA 基因的新特征发现。
BMC Genomics. 2013 Jun 22;14:417. doi: 10.1186/1471-2164-14-417.
7
Molecular characterization and evolution of a chemosensory receptor gene family in three notorious rice planthoppers, Nilaparvata lugens, Sogatella furcifera and Laodelphax striatellus, based on genome and transcriptome analyses.基于基因组和转录组分析对三种重要水稻害虫褐飞虱、白背飞虱和灰飞虱化学感受受体基因家族的分子特征及进化研究
Pest Manag Sci. 2018 Mar 15. doi: 10.1002/ps.4912.
8
Genome-Wide Identification and Expression Profiling of the Wnt Gene Family in Three Rice Planthoppers: Sogatella furcifera, Laodelphax striatellus, and Nilaparvata lugens.三种水稻飞虱:褐飞虱、白背飞虱和灰飞虱中 Wnt 基因家族的全基因组鉴定和表达谱分析。
J Insect Sci. 2022 Sep 1;22(5). doi: 10.1093/jisesa/ieac049.
9
Effects of two pesticides, TZP and JGM, on reproduction of three planthopper species, Nilaparvata lugens Stål, Sogatella furcifera Horvath, and Laodelphax striatella Fallén.两种杀虫剂TZP和JGM对三种飞虱,即褐飞虱、白背飞虱和灰飞虱繁殖的影响。
Pestic Biochem Physiol. 2014 Oct;115:53-7. doi: 10.1016/j.pestbp.2014.07.012. Epub 2014 Aug 23.
10
Species-specific markers for and (Hemiptera: Delphacidae) based on mitochondrial cytochrome oxidase I.基于线粒体细胞色素氧化酶I的飞虱科(半翅目:飞虱科)物种特异性标记。
3 Biotech. 2023 Aug;13(8):269. doi: 10.1007/s13205-023-03693-x. Epub 2023 Jul 11.

引用本文的文献

1
Species-specific markers for and (Hemiptera: Delphacidae) based on mitochondrial cytochrome oxidase I.基于线粒体细胞色素氧化酶I的飞虱科(半翅目:飞虱科)物种特异性标记。
3 Biotech. 2023 Aug;13(8):269. doi: 10.1007/s13205-023-03693-x. Epub 2023 Jul 11.
2
Pest categorisation of .……的有害生物分类
EFSA J. 2023 May 12;21(5):e07999. doi: 10.2903/j.efsa.2023.7999. eCollection 2023 May.

本文引用的文献

1
Genome-Wide Searching Single Nucleotide-Polymorphisms (SNPs) and SNPs-Targeting a Multiplex Primer for Identification of Common Serotypes.全基因组搜索单核苷酸多态性(SNP)以及用于鉴定常见血清型的靶向SNP的多重引物
Pathogens. 2022 Sep 21;11(10):1075. doi: 10.3390/pathogens11101075.
2
Development of a LAMP-Based Molecular Species Diagnosis Method for Four Major Agricultural Pests in the Genus (Lepidoptera: Noctuidae).基于环介导等温扩增技术的夜蛾科四种主要农业害虫分子物种诊断方法的开发 (鳞翅目:夜蛾科)
Insects. 2021 Sep 29;12(10):883. doi: 10.3390/insects12100883.
3
A strategy for a high enrichment of insect mitochondrial DNA for mitogenomic analysis.
一种用于高富集昆虫线粒体DNA以进行线粒体基因组分析的策略。
Gene. 2022 Jan 15;808:145986. doi: 10.1016/j.gene.2021.145986. Epub 2021 Sep 30.
4
MEGA11: Molecular Evolutionary Genetics Analysis Version 11.MEGA11:分子进化遗传学分析版本 11。
Mol Biol Evol. 2021 Jun 25;38(7):3022-3027. doi: 10.1093/molbev/msab120.
5
A rapid multiplex PCR assay for species identification of Asian rice planthoppers (Hemiptera: Delphacidae) and its application to early-instar nymphs in paddy fields.一种用于亚洲稻飞虱(半翅目:飞虱科)物种鉴定的快速多重PCR检测方法及其在稻田低龄若虫中的应用。
PLoS One. 2021 Apr 23;16(4):e0250471. doi: 10.1371/journal.pone.0250471. eCollection 2021.
6
Development and application of a multiplex PCR system for drowning diagnosis.用于溺亡诊断的多重 PCR 系统的开发与应用。
Electrophoresis. 2021 Jun;42(11):1270-1278. doi: 10.1002/elps.202000265. Epub 2021 Mar 20.
7
Development of a simple and accurate molecular tool for Spodoptera frugiperda species identification using LAMP.利用环介导等温扩增(LAMP)技术开发一种简单、准确的鉴定斜纹夜蛾属物种的分子工具。
Pest Manag Sci. 2021 Jul;77(7):3145-3153. doi: 10.1002/ps.6350. Epub 2021 Mar 13.
8
LAMP Diagnostics at the Point-of-Care: Emerging Trends and Perspectives for the Developer Community.即时检测领域的 LAMP 诊断:开发者社区的新兴趋势和观点。
Expert Rev Mol Diagn. 2021 Jan;21(1):43-61. doi: 10.1080/14737159.2021.1873769. Epub 2021 Jan 27.
9
Functional analysis of Ultrabithorax in the wing-dimorphic planthopper Nilaparvata lugens (Stål, 1854) (Hemiptera: Delphacidae).超翅基因在二型性蝉蜚蠊(Nilaparvata lugens (Stål, 1854))(半翅目:飞虱科)翅中的功能分析。
Gene. 2020 May 5;737:144446. doi: 10.1016/j.gene.2020.144446. Epub 2020 Feb 5.
10
Loop-mediated amplification as promising on-site detection approach for Legionella pneumophila and Legionella spp.环介导等温扩增技术作为一种有前途的军团菌属和军团菌属现场检测方法。
Appl Microbiol Biotechnol. 2020 Jan;104(1):405-415. doi: 10.1007/s00253-019-10286-3. Epub 2019 Dec 12.