Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, Arizona, USA.
Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona, USA.
Appl Environ Microbiol. 2023 Mar 29;89(3):e0154322. doi: 10.1128/aem.01543-22. Epub 2023 Feb 27.
Increases in Arctic temperatures have thawed permafrost and accelerated tundra soil microbial activity, releasing greenhouse gases that amplify climate warming. Warming over time has also accelerated shrub encroachment in the tundra, altering plant input abundance and quality, and causing further changes to soil microbial processes. To better understand the effects of increased temperature and the accumulated effects of climate change on soil bacterial activity, we quantified the growth responses of individual bacterial taxa to short-term warming (3 months) and long-term warming (29 years) in moist acidic tussock tundra. Intact soil was assayed in the field for 30 days using O-labeled water, from which taxon-specific rates of O incorporation into DNA were estimated as a proxy for growth. Experimental treatments warmed the soil by approximately 1.5°C. Short-term warming increased average relative growth rates across the assemblage by 36%, and this increase was attributable to emergent growing taxa not detected in other treatments that doubled the diversity of growing bacteria. However, long-term warming increased average relative growth rates by 151%, and this was largely attributable to taxa that co-occurred in the ambient temperature controls. There was also coherence in relative growth rates within broad taxonomic levels with orders tending to have similar growth rates in all treatments. Growth responses tended to be neutral in short-term warming and positive in long-term warming for most taxa and phylogenetic groups co-occurring across treatments regardless of phylogeny. Taken together, growing bacteria responded distinctly to short-term and long-term warming, and taxa growing in each treatment exhibited deep phylogenetic organization. Soil carbon stocks in the tundra and underlying permafrost have become increasingly vulnerable to microbial decomposition due to climate change. The microbial responses to Arctic warming must be understood in order to predict the effects of future microbial activity on carbon balance in a warming Arctic. In response to our warming treatments, tundra soil bacteria grew faster, consistent with increased rates of decomposition and carbon flux to the atmosphere. Our findings suggest that bacterial growth rates may continue to increase in the coming decades as faster growth is driven by the accumulated effects of long-term warming. Observed phylogenetic organization of bacterial growth rates may also permit taxonomy-based predictions of bacterial responses to climate change and inclusion into ecosystem models.
北极地区温度的升高已经使永久冻土融化,并加速了冻原土壤微生物的活动,释放出加剧气候变暖的温室气体。随着时间的推移,变暖还加速了冻原地区灌木的蔓延,改变了植物输入的丰度和质量,并进一步导致土壤微生物过程发生变化。为了更好地了解温度升高和气候变化的累积效应对土壤细菌活动的影响,我们量化了单个细菌分类群对短期(3 个月)和长期(29 年)变暖的生长反应,在潮湿酸性草丛冻原的野外使用 O 标记水对完整土壤进行了 30 天的分析,从中估计了分类群特异性的 O 掺入 DNA 的速率,作为生长的替代物。实验处理使土壤变暖约 1.5°C。短期变暖使整个集合的平均相对增长率提高了 36%,这一增长归因于在其他处理中未检测到的新兴生长分类群,这些分类群使生长细菌的多样性增加了一倍。然而,长期变暖使平均相对增长率提高了 151%,这主要归因于在环境温度对照中共同存在的分类群。在广泛的分类水平内,相对增长率也具有一致性,订单在所有处理中都具有相似的增长率。无论系统发育如何,大多数分类群和系统发育组在短期变暖中表现出中性的生长反应,在长期变暖中表现出积极的生长反应,并且在所有处理中共同存在。总的来说,生长中的细菌对短期和长期变暖的反应明显不同,在每个处理中生长的分类群表现出深刻的系统发育组织。由于气候变化,冻原和下面的永久冻土中的土壤碳储量越来越容易受到微生物分解的影响。为了预测未来微生物活动对变暖北极地区碳平衡的影响,必须了解北极变暖对微生物的影响。作为对我们变暖处理的响应,冻原土壤细菌生长更快,与向大气中分解和碳通量增加一致。我们的研究结果表明,随着长期变暖的累积效应推动更快的生长,未来几十年细菌生长速率可能会继续增加。观察到的细菌生长速率的系统发育组织也可能允许基于分类的细菌对气候变化的反应预测,并将其纳入生态系统模型。