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基于多任务学习的肝细胞癌分割与病理分化程度预测方法

[Hepatocellular carcinoma segmentation and pathological differentiation degree prediction method based on multi-task learning].

作者信息

Wen Han, Zhao Ying, Yang Yong, Wang Hongkai, Liu Ailian, Yao Yu, Fu Zhongliang

机构信息

Chengdu Institute of Computer Applications, Chinese Academy of Sciences, Chengdu 610213, P. R. China.

University of Chinese Academy of Sciences, Beijing 100049, P. R. China.

出版信息

Sheng Wu Yi Xue Gong Cheng Xue Za Zhi. 2023 Feb 25;40(1):60-69. doi: 10.7507/1001-5515.202208045.

DOI:10.7507/1001-5515.202208045
PMID:36854549
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9989768/
Abstract

Hepatocellular carcinoma (HCC) is the most common liver malignancy, where HCC segmentation and prediction of the degree of pathological differentiation are two important tasks in surgical treatment and prognosis evaluation. Existing methods usually solve these two problems independently without considering the correlation of the two tasks. In this paper, we propose a multi-task learning model that aims to accomplish the segmentation task and classification task simultaneously. The model consists of a segmentation subnet and a classification subnet. A multi-scale feature fusion method is proposed in the classification subnet to improve the classification accuracy, and a boundary-aware attention is designed in the segmentation subnet to solve the problem of tumor over-segmentation. A dynamic weighted average multi-task loss is used to make the model achieve optimal performance in both tasks simultaneously. The experimental results of this method on 295 HCC patients are superior to other multi-task learning methods, with a Dice similarity coefficient (Dice) of (83.9 ± 0.88)% on the segmentation task, while the average recall is (86.08 ± 0.83)% and an F1 score is (80.05 ± 1.7)% on the classification task. The results show that the multi-task learning method proposed in this paper can perform the classification task and segmentation task well at the same time, which can provide theoretical reference for clinical diagnosis and treatment of HCC patients.

摘要

肝细胞癌(HCC)是最常见的肝脏恶性肿瘤,其中HCC分割和病理分化程度预测是外科治疗和预后评估中的两项重要任务。现有方法通常独立解决这两个问题,而不考虑这两项任务的相关性。在本文中,我们提出了一种多任务学习模型,旨在同时完成分割任务和分类任务。该模型由一个分割子网和一个分类子网组成。在分类子网中提出了一种多尺度特征融合方法以提高分类准确率,在分割子网中设计了一种边界感知注意力机制来解决肿瘤过度分割问题。使用动态加权平均多任务损失使模型在两项任务中同时实现最优性能。该方法在295例HCC患者上的实验结果优于其他多任务学习方法,在分割任务上的骰子相似系数(Dice)为(83.9 ± 0.88)%,而在分类任务上的平均召回率为(86.08 ± 0.83)%,F1分数为(80.05 ± 1.7)%。结果表明,本文提出的多任务学习方法能够同时很好地完成分类任务和分割任务,可为HCC患者的临床诊断和治疗提供理论参考。

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本文引用的文献

1
MultiR-Net: A Novel Joint Learning Network for COVID-19 segmentation and classification.多模态网络:一种用于 COVID-19 分割和分类的新型联合学习网络。
Comput Biol Med. 2022 May;144:105340. doi: 10.1016/j.compbiomed.2022.105340. Epub 2022 Mar 11.
2
KiU-Net: Overcomplete Convolutional Architectures for Biomedical Image and Volumetric Segmentation.KiU-Net:用于生物医学图像和体积分割的过完备卷积架构。
IEEE Trans Med Imaging. 2022 Apr;41(4):965-976. doi: 10.1109/TMI.2021.3130469. Epub 2022 Apr 1.
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Multi-task learning for segmentation and classification of tumors in 3D automated breast ultrasound images.多任务学习在三维自动化乳腺超声图像中肿瘤的分割和分类。
Med Image Anal. 2021 May;70:101918. doi: 10.1016/j.media.2020.101918. Epub 2020 Nov 28.
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Noninvasive Evaluation of the Pathologic Grade of Hepatocellular Carcinoma Using MCF-3DCNN: A Pilot Study.使用 MCF-3DCNN 对肝细胞癌的病理分级进行无创评估:一项初步研究。
Biomed Res Int. 2019 Apr 28;2019:9783106. doi: 10.1155/2019/9783106. eCollection 2019.
5
Grading of hepatocellular carcinoma using 3D SE-DenseNet in dynamic enhanced MR images.基于动态增强磁共振成像的 3D SE-DenseNet 对肝细胞癌进行分级。
Comput Biol Med. 2019 Apr;107:47-57. doi: 10.1016/j.compbiomed.2019.01.026. Epub 2019 Feb 4.
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CT/MRI LI-RADS v2017 - review of the guidelines.CT/MRI肝脏影像报告和数据系统(LI-RADS)v2017——指南解读
Pol J Radiol. 2018 Jul 16;83:e355-e365. doi: 10.5114/pjr.2018.78391. eCollection 2018.
7
Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.全球癌症统计数据 2018:GLOBOCAN 对全球 185 个国家/地区 36 种癌症的发病率和死亡率的估计。
CA Cancer J Clin. 2018 Nov;68(6):394-424. doi: 10.3322/caac.21492. Epub 2018 Sep 12.
8
Hepatocellular carcinoma: epidemiology and molecular carcinogenesis.肝细胞癌:流行病学与分子致癌机制
Gastroenterology. 2007 Jun;132(7):2557-76. doi: 10.1053/j.gastro.2007.04.061.