Wang Linlin, Fu Hongbo, Zhao Juan, Wang Jiagang, Dong Shuqi, Yuan Xiangyang, Li Xiaorui, Chen Mingxun
State Key Laboratory of Sustainable Dryland Agriculture (in preparation), College of Agronomy, Shanxi Agricultural University, Taiyuan 030031, China.
Key Laboratory for Research and Utilization of Characteristic Biological Resources in Southern Yunnan, College of Biological and Agricultural Sciences, Honghe University, Mengzi 661100, China.
Plants (Basel). 2023 Mar 2;12(5):1138. doi: 10.3390/plants12051138.
Glutathione -transferases (GSTs) are a critical superfamily of multifunctional enzymes in plants. As a ligand or binding protein, GSTs regulate plant growth and development and detoxification. Foxtail millet ( (L.) P. ) could respond to abiotic stresses through a highly complex multi-gene regulatory network in which the GST family is also involved. However, genes have been scarcely studied in foxtail millet. Genome-wide identification and expression characteristics analysis of the foxtail millet GST gene family were conducted by biological information technology. The results showed that 73 genes () were identified in the foxtail millet genome and were divided into seven classes. The chromosome localization results showed uneven distribution of on the seven chromosomes. There were 30 tandem duplication gene pairs belonging to 11 clusters. Only one pair of and were identified as fragment duplication genes. A total of ten conserved motifs were identified in the GST family of foxtail millet. The gene structure of is relatively conservative, but the number and length of exons of each gene are still different. The cis-acting elements in the promoter region of 73 genes showed that 94.5% of genes possessed defense and stress-responsive elements. The expression profiles of 37 genes covering 21 tissues suggested that most genes were expressed in multiple organs and were highly expressed in roots and leaves. By qPCR analysis, we found that 21 genes were responsive to abiotic stresses and abscisic acid (ABA). Taken together, this study provides a theoretical basis for identifying foxtail millet GST family information and improving their responses to different stresses.
谷胱甘肽 -S-转移酶(GSTs)是植物中一类关键的多功能酶超家族。作为一种配体或结合蛋白,GSTs调节植物的生长发育和解毒作用。谷子(Setaria italica (L.) P. Beauv.)可通过一个高度复杂的多基因调控网络来应对非生物胁迫,其中GST家族也参与其中。然而,谷子中的GST基因鲜有研究。利用生物信息技术对谷子GST基因家族进行了全基因组鉴定和表达特征分析。结果表明,在谷子基因组中鉴定出73个GST基因,并分为七类。染色体定位结果显示这些基因在七条染色体上分布不均。有30个串联重复基因对,属于11个簇。仅鉴定出一对GST和FES1为片段重复基因。在谷子GST家族中共鉴定出10个保守基序。GST基因结构相对保守,但每个基因的外显子数量和长度仍存在差异。73个GST基因启动子区域的顺式作用元件表明,94.5%的GST基因具有防御和胁迫响应元件。对覆盖21个组织的37个GST基因的表达谱分析表明,大多数GST基因在多个器官中表达,且在根和叶中高表达。通过qPCR分析,我们发现21个GST基因对非生物胁迫和脱落酸(ABA)有响应。综上所述,本研究为鉴定谷子GST家族信息及提高其对不同胁迫的响应提供了理论依据。