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西巴尔干地区古老硬粒小麦品种“Rogosija”的单核苷酸多态性多样性与遗传结构

SNP Diversity and Genetic Structure of "Rogosija", an Old Western Balkan Durum Wheat Collection.

作者信息

Velimirović Ana, Jovović Zoran, Perović Dragan, Lehnert Heike, Mikić Sanja, Mandić Dragan, Pržulj Novo, Mangini Giacomo, Finetti-Sialer Mariella Matilde

机构信息

Biotechnical Faculty Podgorica, University of Montenegro, Mihaila Lalića 15, 81000 Podgorica, Montenegro.

Federal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute, Erwin-Baur-Strasse 27, 06484 Quedlinburg, Germany.

出版信息

Plants (Basel). 2023 Mar 3;12(5):1157. doi: 10.3390/plants12051157.

Abstract

Durum wheat landraces represent a genetic resource for the identification and isolation of new valuable genes and alleles, useful to increase the crop adaptability to climate change. Several durum wheat landraces, all denominated "Rogosija", were extensively cultivated in the Western Balkan Peninsula until the first half of the 20th century. Within the conservation program of the Montenegro Plant Gene Bank, these landraces were collected, but without being characterized. The main goal of this study was to estimate the genetic diversity of the "Rogosija collection" consisting of 89 durum accessions, using 17 morphological descriptors and the 25K Illumina single nucleotide polymorphism (SNP) array. The genetic structure analysis of the Rogosija collection showed two distinguished clusters localized in two different Montenegro eco-geographic micro-areas, characterized by continental Mediterranean climate and maritime Mediterranean climate. Data suggest that these clusters could be composed of two different Balkan durum landrace collections evolved in two different eco-geographic micro-areas. Moreover, the origin of Balkan durum landraces is discussed.

摘要

硬粒小麦地方品种是用于鉴定和分离新的有价值基因及等位基因的遗传资源,有助于提高作物对气候变化的适应性。直到20世纪上半叶,几种均被称为“Rogosija”的硬粒小麦地方品种在西巴尔干半岛广泛种植。在黑山植物基因库的保存计划中,这些地方品种被收集起来,但未进行特征描述。本研究的主要目标是利用17个形态学描述符和25K Illumina单核苷酸多态性(SNP)芯片,估计由89个硬粒小麦种质组成的“Rogosija种质库”的遗传多样性。对Rogosija种质库的遗传结构分析显示,两个不同的聚类位于黑山两个不同的生态地理微区域,其特征分别为大陆性地中海气候和海洋性地中海气候。数据表明,这些聚类可能由在两个不同生态地理微区域进化而来的两个不同的巴尔干硬粒小麦地方品种集合组成。此外,还讨论了巴尔干硬粒小麦地方品种的起源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3962/10005349/dba255288838/plants-12-01157-g001.jpg

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