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中国内蒙古地区感染 SARS-CoV-2 患者的临床指征和病毒株变异的综合分析。

Comprehensive analysis of clinical indications and viral strain variants among patients infected with SARS-CoV-2 in Inner Mongolia, China.

机构信息

Department of Laboratory Medicine, Inner Mongolia People's Hospital, Hohhot, 010000, China.

Department of ICU, Inner Mongolia People's Hospital, Hohhot, 010000, China.

出版信息

Virus Genes. 2023 Jun;59(3):391-398. doi: 10.1007/s11262-023-01986-0. Epub 2023 Mar 11.

Abstract

Since the first appearance of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in 2019, the virus is still evolving and mutating until now. In this study, we collected 6 throat swabs from patients who diagnosed with COVID-19 in Inner Mongolia, China, to understand the entry of multiple SARS-CoV-2 variants into Inner Mongolia and analyze the relationships between variants and clinical features observed in infected patients. In addition, we performed a combined analysis of clinical parameters associated with SARS-CoV-2 variants of interest, pedigree analysis, and detection of single-nucleotide polymorphisms. Our results showed that the clinical symptoms were generally mild although some patients demonstrated some degree of liver function abnormalities, and the SARS-CoV-2 strain was related to the Delta variant (B.1.617.2), AY.122 lineage. The epidemiological investigations and clinical manifestations confirmed that the variant exhibits strong transmission, a high viral load, and moderate clinical symptoms. SARS-CoV-2 has undergone extensive mutations in various hosts and countries. Timely monitoring of virus mutation can help to monitor the spread of infection and characterize the diversity of genomic variants, thus limiting future waves of SARS-CoV-2 infection.

摘要

自 2019 年严重急性呼吸综合征冠状病毒 2 (SARS-CoV-2)首次出现以来,该病毒仍在不断进化和变异。在这项研究中,我们从中国内蒙古确诊为 COVID-19 的患者中采集了 6 份咽拭子,以了解多种 SARS-CoV-2 变体进入内蒙古的情况,并分析感染患者中观察到的变体与临床特征之间的关系。此外,我们对与 SARS-CoV-2 变体相关的临床参数、系统发育分析和单核苷酸多态性检测进行了联合分析。研究结果表明,尽管部分患者出现了一定程度的肝功能异常,但临床症状普遍较轻,SARS-CoV-2 株与 Delta 变异株(B.1.617.2)、AY.122 谱系有关。流行病学调查和临床表现证实,该变体具有较强的传播能力、高病毒载量和中等临床症状。SARS-CoV-2 在不同宿主和国家发生了广泛的突变。及时监测病毒突变有助于监测感染的传播,并对基因组变异的多样性进行特征描述,从而限制 SARS-CoV-2 感染的未来浪潮。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4876/10199850/8e371a50c13e/11262_2023_1986_Fig1_HTML.jpg

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