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OprF以营养物质依赖的方式影响生物膜基质胞外DNA水平。

OprF impacts biofilm matrix eDNA levels in a nutrient-dependent manner.

作者信息

Cassin Erin K, Araujo-Hernandez Sophia A, Baughn Dena S, Londono Melissa C, Rodriguez Daniela Q, Tseng Boo Shan

机构信息

School of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV, USA.

出版信息

bioRxiv. 2023 Mar 2:2023.03.01.530729. doi: 10.1101/2023.03.01.530729.

Abstract

UNLABELLED

The biofilm matrix is composed of exopolysaccharides, eDNA, membrane vesicles, and proteins. While proteomic analyses have identified numerous matrix proteins, their functions in the biofilm remain understudied compared to the other biofilm components. In the biofilm, several studies have identified OprF as an abundant matrix protein and, more specifically, as a component of biofilm membrane vesicles. OprF is a major outer membrane porin of cells. However, current data describing the effects of OprF in the biofilm is limited. Here we identify a nutrient-dependent effect of OprF in static biofilms, whereby Δ cells form significantly less biofilm than wild type when grown in media containing glucose or low sodium chloride concentrations. Interestingly, this biofilm defect occurs during late static biofilm formation and is not dependent on the production of PQS, which is responsible for outer membrane vesicle production. Furthermore, while biofilms lacking OprF contain approximately 60% less total biomass than those of wild type, the number of cells in these two biofilms is equivalent. We demonstrate that Δ biofilms with reduced biofilm biomass contain less eDNA than wild-type biofilms. These results suggest that the nutrient-dependent effect of OprF is involved in the maintenance of mature biofilms by retaining eDNA in the matrix.

IMPORTANCE

Many pathogens form biofilms, which are bacterial communities encased in an extracellular matrix that protects them against antibacterial treatments. The roles of several matrix components of the opportunistic pathogen have been characterized. However, the effects of matrix proteins remain understudied and are untapped potential targets for antibiofilm treatments. Here we describe a conditional effect of the abundant matrix protein OprF on late-stage biofilms. A Δ strain formed significantly less biofilm in low sodium chloride or with glucose. Interestingly, the defective Δ biofilms did not exhibit fewer resident cells but contained significantly less extracellular DNA (eDNA) than wild type. These results suggest that OprF is involved in matrix eDNA retention in mature biofilms.

摘要

未标记

生物膜基质由胞外多糖、胞外DNA、膜泡和蛋白质组成。虽然蛋白质组学分析已鉴定出许多基质蛋白,但与生物膜的其他成分相比,它们在生物膜中的功能仍未得到充分研究。在生物膜中,多项研究已确定OprF是一种丰富的基质蛋白,更具体地说,是生物膜膜泡的一个组成部分。OprF是细胞的一种主要外膜孔蛋白。然而,目前描述OprF在生物膜中作用的数据有限。在此,我们确定了OprF在静态生物膜中的营养依赖性效应,即当在含有葡萄糖或低氯化钠浓度的培养基中生长时,Δ菌形成的生物膜明显少于野生型。有趣的是,这种生物膜缺陷发生在静态生物膜形成后期,且不依赖于负责外膜泡产生的PQS的产生。此外,虽然缺乏OprF的生物膜总生物量比野生型生物膜少约60%,但这两种生物膜中的细胞数量相当。我们证明,生物膜生物量减少的Δ生物膜比野生型生物膜含有更少的胞外DNA。这些结果表明,OprF的营养依赖性效应通过将胞外DNA保留在基质中参与成熟生物膜的维持。

重要性

许多病原体形成生物膜,生物膜是包裹在细胞外基质中的细菌群落,可保护它们免受抗菌治疗。机会致病菌的几种基质成分的作用已得到表征。然而,基质蛋白的作用仍未得到充分研究,是抗生物膜治疗中尚未开发的潜在靶点。在此,我们描述了丰富的基质蛋白OprF对后期生物膜的条件性效应。Δ菌株在低氯化钠或有葡萄糖的情况下形成的生物膜明显更少。有趣的是,有缺陷的Δ生物膜中的驻留细胞数量并不少,但与野生型相比,其胞外DNA(eDNA)明显更少。这些结果表明,OprF参与成熟生物膜中基质eDNA 的保留。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d5a8/10002741/e19ee373bb97/nihpp-2023.03.01.530729v1-f0001.jpg

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