Department of Neurological Surgery, Mayo Clinic, Rochester, MN, USA.
Department of Surgery, University of Illinois at Chicago College of Medicine, Chicago, IL, USA.
Sci Rep. 2023 Mar 13;13(1):4107. doi: 10.1038/s41598-023-30765-y.
This study aims to perform a comprehensive genomic analysis to assess the influence of overexpression of MYO1E in non-small cell lung carcinoma (NSCLC) and whether there are differences in survival and mortality risk in NSCLC patients depending on both DNA methylation and RNA expression of MYO1E. The DNA methylation probe cg13887966 was inversely correlated with MYO1E RNA expression in both LUAD and LUSC subpopulations showing that lower MYO1E RNA expression was associated with higher MYO1E DNA methylation. Late stages of lung cancer showed significantly lower MYO1E DNA methylation and significantly higher MYO1E RNA expression for LUAD but not for LUSC. Low DNA methylation as well as high RNA expression of MYO1E are associated with a shorter median survival time and an increased risk of mortality for LUAD, but not for LUSC. This study suggests that changes in MYO1E methylation and expression in LUAD patients may have an essential role in lung cancer's pathogenesis. It shows the utility of MYO1E DNA methylation and RNA expression in predicting survival for LUAD patients. Also, given the low normal expression of MYO1E in blood cells MYO1E DNA methylation has the potential to be used as circulating tumor marker in liquid biopsies.
本研究旨在进行全面的基因组分析,以评估 MYO1E 在非小细胞肺癌(NSCLC)中的过表达对 NSCLC 患者生存和死亡风险的影响,以及取决于 MYO1E 的 DNA 甲基化和 RNA 表达是否存在差异。DNA 甲基化探针 cg13887966 在 LUAD 和 LUSC 亚群中与 MYO1E RNA 表达呈负相关,表明 MYO1E RNA 表达较低与 MYO1E DNA 甲基化水平较高相关。肺癌晚期 LUAD 的 MYO1E DNA 甲基化显著降低,MYO1E RNA 表达显著升高,但 LUSC 则不然。低 DNA 甲基化以及 MYO1E 的高 RNA 表达与 LUAD 的中位生存时间缩短和死亡风险增加相关,但与 LUSC 无关。本研究表明,LUAD 患者中 MYO1E 甲基化和表达的变化可能在肺癌的发病机制中起重要作用。它显示了 MYO1E DNA 甲基化和 RNA 表达在预测 LUAD 患者生存方面的效用。此外,鉴于 MYO1E 在血细胞中的正常低表达,MYO1E DNA 甲基化有可能作为液体活检中的循环肿瘤标志物。