Shandong University of Traditional Chinese Medicine, Jinan, 250355, Shandong, China.
Affiliated Hospital of Shandong University of Traditional Chinese Medicine, Jinan, 250000, Shandong, China.
Sci Rep. 2023 Mar 13;13(1):4180. doi: 10.1038/s41598-023-31413-1.
We aimed to identify the molecular biomarkers of MDD disease progression to uncover potential mechanisms of major depressive disorder (MDD). In this study, three microarray data sets, GSE44593, GSE12654, and GSE54563, were cited from the Gene Expression Omnibus database for performance evaluation. To perform molecular functional enrichment analyses, differentially expressed genes (DEGs) were identified, and a protein-protein interaction network was configured using the Search Tool for the Retrieval of Interacting Genes/Proteins and Cytoscape. To assess multi-purpose functions and pathways, such as signal transduction, plasma membrane, protein binding, and cancer pathways, a total of 220 DEGs, including 143 upregulated and 77 downregulated genes, were selected. Additionally, six central genes were observed, including electron transport system variant transcription factor 6, FMS-related receptor tyrosine kinase 3, carnosine synthetase 1, solute carrier family 22 member 13, prostaglandin endoperoxide synthetase 2, and protein serine kinase H1, which had a significant impact on cell proliferation, extracellular exosome, protein binding, and hypoxia-inducible factor 1 signaling pathway. This study enhances our understanding of the molecular mechanism of the occurrence and progression of MDD and provides candidate targets for its diagnosis and treatment.
我们旨在确定 MDD 疾病进展的分子生物标志物,以揭示重度抑郁症(MDD)的潜在机制。在这项研究中,从基因表达综合数据库中引用了三个微阵列数据集 GSE44593、GSE12654 和 GSE54563 进行性能评估。为了进行分子功能富集分析,鉴定了差异表达基因(DEGs),并使用 Search Tool for the Retrieval of Interacting Genes/Proteins 和 Cytoscape 构建了蛋白质-蛋白质相互作用网络。为了评估信号转导、质膜、蛋白质结合和癌症途径等多用途功能和途径,共选择了 220 个 DEGs,包括 143 个上调基因和 77 个下调基因。此外,观察到六个核心基因,包括电子传递系统变体转录因子 6、FMS 相关受体酪氨酸激酶 3、肌肽合成酶 1、溶质载体家族 22 成员 13、前列腺素内过氧化物合酶 2 和蛋白丝氨酸激酶 H1,它们对细胞增殖、细胞外外泌体、蛋白质结合和缺氧诱导因子 1 信号通路有重大影响。本研究增强了我们对 MDD 发生和进展的分子机制的理解,并为其诊断和治疗提供了候选靶点。