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饱和诱变筛选鉴定出一个调控表达的功能基因组位点。

Saturating Mutagenesis Screening Identifies a Functional Genomic Locus that Regulates Expression.

作者信息

Qiu Yan, Liu Xiaojian, Sun Yingmin, Li Shuang, Wei Yuda, Tian Cheng, Ding Qiurong

机构信息

CAS Key Laboratory of Nutrition, Metabolism and Food Safety, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai, 200031 People's Republic of China.

Institute for Stem Cell and Regeneration, Chinese Academy of Sciences, Beijing, 100101 People's Republic of China.

出版信息

Phenomics. 2021 Feb 22;1(1):15-21. doi: 10.1007/s43657-020-00006-7. eCollection 2021 Feb.

Abstract

A better understanding of the molecular mechanisms that control the UCP1 expression in brown and beige adipocytes is essential for us to modulate adipose cell fate and promote thermogenesis, which may provide a therapeutic view for the treatment of obesity and obesity-related diseases. To systematically identify -element(s) that transcriptionally regulates we here took advantage of the high-throughput CRIPSR-Cas9 screening system, and performed an  saturating mutagenesis screen, by using a customized sgRNA library targeting the ~ 20 kb genomic region near . Through the screening, we have identified several genomic loci that may contain key regulatory element for expression in cultured brown and white adipocytes , and in inguinal white adipose tissue . Our study highlights a broadly useful approach for studying regulatory elements in a high-throughput manner.

摘要

更好地理解控制棕色和米色脂肪细胞中UCP1表达的分子机制,对于我们调节脂肪细胞命运和促进产热至关重要,这可能为肥胖及肥胖相关疾病的治疗提供一种治疗思路。为了系统地鉴定转录调控UCP1的元件,我们在此利用高通量CRIPSR-Cas9筛选系统,通过使用靶向UCP1附近约20 kb基因组区域的定制sgRNA文库,进行了饱和诱变筛选。通过筛选,我们已经鉴定出几个基因组位点,这些位点可能包含在培养的棕色和白色脂肪细胞以及腹股沟白色脂肪组织中UCP1表达的关键调控元件。我们的研究突出了一种以高通量方式研究调控元件的广泛有用的方法。

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