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建立荧光诱导型体系定量检测游离岩藻糖。

Developing a Fluorescent Inducible System for Free Fucose Quantification in .

机构信息

Department of Chemical and Bioprocess Engineering, School of Engineering, Pontificia Universidad Católica de Chile, Vicuña Mackenna, 4860, Santiago 8331150, Chile.

出版信息

Biosensors (Basel). 2023 Mar 15;13(3):388. doi: 10.3390/bios13030388.

Abstract

L-Fucose is a monosaccharide abundant in mammalian glycoconjugates. In humans, fucose can be found in human milk oligosaccharides (HMOs), mucins, and glycoproteins in the intestinal epithelium. The bacterial consumption of fucose and fucosylated HMOs is critical in the gut microbiome assembly of infants, dominated by . Fucose metabolism is important for the production of short-chain fatty acids and is involved in cross-feeding microbial interactions. Methods for assessing fucose concentrations in complex media are lacking. Here we designed and developed a molecular quantification method of free fucose using fluorescent . For this, low- and high-copy plasmids were evaluated with and without the transcription factor and its respective fucose-inducible promoter controlling the reporter gene sfGFP. BL21 transformed with a high copy plasmid containing and displayed a high resolution across increasing fucose concentrations and high fluorescence/OD values after 18 h. The molecular circuit was specific against other monosaccharides and showed a linear response in the 0-45 mM range. Adjusting data to the Hill equation suggested non-cooperative, simple regulation of FucR to its promoter. Finally, the biosensor was tested on different concentrations of free fucose and the supernatant of JCM 1254 supplemented with 2-fucosyl lactose, indicating the applicability of the method in detecting free fucose. In conclusion, a bacterial biosensor of fucose was validated with good sensitivity and precision. A biological method for quantifying fucose could be useful for nutraceutical and microbiological applications, as well as molecular diagnostics.

摘要

岩藻糖是一种在哺乳动物糖缀合物中丰富的单糖。在人类中,岩藻糖可以在人乳寡糖(HMOs)、粘蛋白和肠上皮中的糖蛋白中找到。细菌对岩藻糖和岩藻糖基 HMOs 的消耗对婴儿肠道微生物组的组装至关重要,主要由 主导。岩藻糖代谢对于短链脂肪酸的产生很重要,并且涉及到微生物相互作用的交叉喂养。目前缺乏评估复杂介质中岩藻糖浓度的方法。在这里,我们设计并开发了一种使用荧光 分子定量游离岩藻糖的方法。为此,评估了带有和不带有转录因子 及其各自诱导报告基因 sfGFP 的岩藻糖诱导启动子的低拷贝和高拷贝质粒。用含有 和 的高拷贝质粒转化的 BL21 在增加的岩藻糖浓度下显示出高分辨率,并且在 18 小时后显示出高荧光/OD 值。分子电路特异性针对其他单糖,在 0-45 mM 范围内呈线性响应。将数据调整到 Hill 方程表明,FucR 对其启动子的调节是非合作的、简单的。最后,该生物传感器在不同浓度的游离岩藻糖和添加 2-岩藻糖基乳糖的 JCM 1254 上清液上进行了测试,表明该方法在检测游离岩藻糖方面的适用性。总之,验证了一种具有良好灵敏度和精密度的细菌岩藻糖生物传感器。用于定量岩藻糖的生物方法可用于营养和微生物学应用以及分子诊断。

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