Gómez-Ollé Aynhoa, Bullones Amanda, Hormaza Jose I, Mueller Lukas A, Fernandez-Pozo Noe
Institute for Mediterranean and Subtropical Horticulture "La Mayora" (IHSM La Mayora-CSIC-UMA), 29010 Málaga, Spain.
Department of Biochemistry and Molecular Biology, Universidad de Málaga (UMA), 29010 Málaga, Spain.
Plants (Basel). 2023 Mar 10;12(6):1273. doi: 10.3390/plants12061273.
Mango ( L.) (2n = 40) is a member of the Anacardiaceae family, which was domesticated at least 4000 years ago in Asia. Mangoes are delicious fruits with great nutritional value. They are one of the major fruit crops worldwide, cultivated in more than 100 countries, with a production of more than 40 million tons. Recently the genome sequences of several mango varieties have been released, but there are no bioinformatics platforms dedicated to mango genomics and breeding to host mango omics data. Here, we present MangoBase, a web portal dedicated to mango genomics, which provides multiple interactive bioinformatics tools, sequences, and annotations to analyze, visualize, and download omics data related to mango. Additionally, MangoBase includes a gene expression atlas with 12 datasets and 80 experiments representing some of the most significant mango RNA-seq experiments published to this date. These experiments study mango fruit ripening in several cultivars with different pulp firmness and sweetness or peel coloration, and other experiments also study hot water postharvest treatment, infection with , and the main mango tree organ tissues.
芒果（Mangifera indica L.）（2n = 40）是漆树科的一员，至少在4000年前于亚洲被驯化。芒果是美味且具有很高营养价值的水果。它们是全球主要的水果作物之一，在100多个国家种植，产量超过4000万吨。最近，多个芒果品种的基因组序列已被公布，但尚无专门用于芒果基因组学和育种的生物信息学平台来托管芒果组学数据。在此，我们展示了MangoBase，一个致力于芒果基因组学的门户网站，它提供了多种交互式生物信息学工具、序列和注释，用于分析、可视化和下载与芒果相关的组学数据。此外，MangoBase包含一个基因表达图谱，其中有12个数据集和80个实验，代表了迄今为止已发表的一些最重要的芒果RNA测序实验。这些实验研究了几个具有不同果肉硬度、甜度或果皮颜色的品种的芒果果实成熟过程，其他实验还研究了采后热水处理、感染情况以及芒果树的主要器官组织。
