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基于生态位比较鉴定猴痘病毒最可能的哺乳动物宿主。

Identifying the Most Probable Mammal Reservoir Hosts for Monkeypox Virus Based on Ecological Niche Comparisons.

机构信息

Institut de Systématique, Évolution, Biodiversité (ISYEB), Sorbonne Université, MNHN, CNRS, EPHE, UA, 75005 Paris, France.

Unité Épidémiologie et Physiopathologie des Virus Oncogènes, Institut Pasteur, Université Paris Cité, CNRS UMR 3569, 75015 Paris, France.

出版信息

Viruses. 2023 Mar 11;15(3):727. doi: 10.3390/v15030727.

Abstract

Previous human cases or epidemics have suggested that Monkeypox virus (MPXV) can be transmitted through contact with animals of African rainforests. Although MPXV has been identified in many mammal species, most are likely secondary hosts, and the reservoir host has yet to be discovered. In this study, we provide the full list of African mammal genera (and species) in which MPXV was previously detected, and predict the geographic distributions of all species of these genera based on museum specimens and an ecological niche modelling (ENM) method. Then, we reconstruct the ecological niche of MPXV using georeferenced data on animal MPXV sequences and human index cases, and conduct overlap analyses with the ecological niches inferred for 99 mammal species, in order to identify the most probable animal reservoir. Our results show that the MPXV niche covers three African rainforests: the Congo Basin, and Upper and Lower Guinean forests. The four mammal species showing the best niche overlap with MPXV are all arboreal rodents, including three squirrels: , , , and . We conclude that the most probable MPXV reservoir is . based on two niche overlap metrics, the areas of higher probabilities of occurrence, and available data on MPXV detection.

摘要

以往的人类病例或疫情表明,猴痘病毒(MPXV)可以通过接触非洲雨林中的动物传播。虽然已在许多哺乳动物物种中发现了 MPXV,但大多数可能是次要宿主,而储主尚未被发现。在这项研究中,我们提供了之前检测到 MPXV 的所有非洲哺乳动物属(和种)的完整列表,并根据博物馆标本和生态位模型(ENM)方法预测了这些属的所有物种的地理分布。然后,我们使用动物 MPXV 序列和人类索引病例的地理参考数据来重建 MPXV 的生态位,并与为 99 种哺乳动物物种推断出的生态位进行重叠分析,以确定最可能的动物储主。我们的研究结果表明,MPXV 的生态位覆盖了三个非洲雨林:刚果盆地、上几内亚森林和下几内亚森林。与 MPXV 具有最佳生态位重叠的四种哺乳动物都是树栖啮齿动物,包括三种松鼠:、、和。我们得出结论,最有可能的 MPXV 储主是,基于两个生态位重叠指标,即更高发生概率的区域和关于 MPXV 检测的可用数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/10057484/adc970f40d22/viruses-15-00727-g001.jpg

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