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肠道病毒 Henu 2 在急性肠胃炎患者病毒组中的特征。

Characterization of Phietavirus Henu 2 in the virome of individuals with acute gastroenteritis.

机构信息

Laboratório de Diversidade Viral, Instituto de Ciências Biológicais, Universidade Federal do Pará, Belém, Pará, 66075-000, Brazil.

Secretaria de Saúde do Tocantins, Palmas, Tocantins, 77453-000, Brazil.

出版信息

Virus Genes. 2023 Jun;59(3):464-472. doi: 10.1007/s11262-023-01990-4. Epub 2023 Apr 1.

Abstract

There is a growing interest in phages as potential biotechnological tools in human health owing to the antibacterial activity of these viruses. In this study, we characterized a new member (named PhiV_005_BRA/2016) of the recently identified phage species Phietavirus Henu 2. PhiV_005_BRA/2016 was detected through metagenomic analysis of stool samples of individuals with acute gastroenteritis. PhiV_005_BRA/2016 contains double-stranded linear DNA (dsDNA), it has a genome of 43,513 base pairs (bp), with a high identity score (99%) with phage of the genus Phietavirus, species of Phietavirus Henu 2. Life style prediction indicated that PhiV_005_BRA/2016 is a lysogenic phage whose the main host is methicillin-resistant Staphylococcus aureus (MRSA). Indeed, we found PhiV_005_BRA/2016 partially integrated in the genome of distinct MRSA strains. Our findings highlights the importance of large-scale screening of bacteriophages to better understand the emergence of multi-drug resistant bacterial.

摘要

由于这些病毒具有抗菌活性,噬菌体作为人类健康潜在的生物技术工具越来越受到关注。在这项研究中,我们对最近鉴定的噬菌体物种 PhiV_005_BRA/2016 进行了特征描述。PhiV_005_BRA/2016 是通过对急性肠胃炎个体的粪便样本进行宏基因组分析检测到的。PhiV_005_BRA/2016 含有双链线性 DNA(dsDNA),基因组大小为 43513 个碱基对(bp),与属噬菌体、属噬菌体 Henu 2 的噬菌体具有高度的同一性得分(99%)。生活方式预测表明,PhiV_005_BRA/2016 是一种溶原性噬菌体,其主要宿主是耐甲氧西林金黄色葡萄球菌(MRSA)。事实上,我们发现 PhiV_005_BRA/2016 部分整合到不同 MRSA 菌株的基因组中。我们的研究结果强调了大规模筛选噬菌体以更好地了解多药耐药细菌出现的重要性。

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