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从猪分离出的两株致病性多杀性巴氏杆菌D:6型菌株的全基因组测序

Whole-Genome Sequencing of Two Pathogenic Pasteurella multocida Type D:6 Strains Isolated from Pigs.

作者信息

Livingstone Morag, Jorgensen Pernille, McCall Margaret, Thomson Jill, Longbottom David

机构信息

Moredun Research Institute, Edinburgh, Midlothian, United Kingdom.

Scotland's Rural College, Aberdeen Veterinary Disease Surveillance Centre, Bucksburn, Aberdeen, United Kingdom.

出版信息

Microbiol Resour Announc. 2023 May 17;12(5):e0009823. doi: 10.1128/mra.00098-23. Epub 2023 Apr 3.

DOI:10.1128/mra.00098-23
PMID:37010432
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10190538/
Abstract

Here, we report the complete genome sequences of Pasteurella multocida strains P504190 and P504188/1, which were isolated from the diseased lungs of a sow and her piglet, respectively. Despite the unusual clinical presentation, whole-genome sequence typing revealed both strains to be capsular type D and lipopolysaccharide (LPS) group 6, commonly found in pigs.

摘要

在此,我们报告了多杀性巴氏杆菌菌株P504190和P504188/1的全基因组序列,它们分别从一头母猪及其仔猪的患病肺部分离得到。尽管临床表现异常,但全基因组序列分型显示这两个菌株均为D型荚膜和6型脂多糖(LPS),这在猪中很常见。

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Whole-Genome Sequencing of Two Pathogenic Pasteurella multocida Type D:6 Strains Isolated from Pigs.从猪分离出的两株致病性多杀性巴氏杆菌D:6型菌株的全基因组测序
Microbiol Resour Announc. 2023 May 17;12(5):e0009823. doi: 10.1128/mra.00098-23. Epub 2023 Apr 3.
2
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本文引用的文献

1
Prediction of Pasteurella multocida serotypes based on whole genomic sequences.基于全基因组序列预测多杀巴斯德氏菌血清型。
Vet Microbiol. 2022 Aug;271:109492. doi: 10.1016/j.vetmic.2022.109492. Epub 2022 Jun 11.
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capsular: lipopolysaccharide types D:L6 and A:L3 remain to be the main epidemic genotypes of pigs in China.荚膜:脂多糖D型:L6和A型:L3仍然是中国猪的主要流行基因型。
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Pasteurella multocida: Genotypes and Genomics.多杀巴斯德菌:基因型与基因组学。
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Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
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