Agrawal Shreni, Das Richa, Singh Amit Kumar, Kumar Pradeep, Shukla Praveen Kumar, Bhattacharya Indrani, Tripathi Amit Kumar, Mishra Sunil Kumar, Tiwari Kavindra Nath
Department of Biotechnology, Parul Institute of Applied Science, Parul University, Vadodara, 391760, Gujarat, India.
Department of Pharmaceutical Engineering and Technology, Indian Institute of Technology, Banaras Hindu University, Varanasi, 221005, UP, India.
Med Oncol. 2023 Apr 3;40(5):133. doi: 10.1007/s12032-023-01996-w.
In pancreatic cancer, healthy cells in the pancreas begin to malfunction and proliferate out of control. According to our conventional knowledge, many plants contain several novel bioactive compounds, having pharmaceutical applications for the treatment of disease like pancreatic cancer. The methanolic fraction of fruit extract of Trema orientalis L. (MFETO) was analysed through HRMS. In this in silico study, pharmacokinetic and physicochemical properties of the identified flavonoids from MFETO were screened out by ADMET analysis. Kaempferol and catechin followed Lipinski rules and showed no toxicity in Protox II. Targets of these compounds were taken from SwissTarget prediction and TCMSP whilst targets for pancreatic cancer were taken from GeneCards and DisGeNET databases. The protein-protein interaction (PPI) network of common genes was generated through STRING and then exported to the Cytoscape to get top 5 hub genes (AKT1, SRC, EGFR, TNF, and CASP3). The interaction between compounds and hub genes was analysed using molecular docking, and high binding affinity between them can be visualised by Biovia discovery studio visualizer. Our study shows that, five hub genes related to pancreatic cancer play an important role in tumour growth induction, invasion and migration. Kaempferol effectively check cell migration by inhibiting ERK1/2, EGFR-related SRC, and AKT pathways by scavenging ROS whilst catechin inhibited TNFα-induced activation and cell cycle arrest at G1 and G2/M phases by induction of apoptosis of malignant cells. Kaempferol and catechin containing MFETO can be used for formulation of potent drugs for pancreatic cancer treatment in future.
在胰腺癌中,胰腺中的健康细胞开始功能失调并失控增殖。根据我们的传统知识,许多植物含有几种新型生物活性化合物,具有治疗胰腺癌等疾病的药用价值。通过高分辨率质谱法(HRMS)分析了山黄麻果实提取物的甲醇提取物(MFETO)。在这项计算机模拟研究中,通过ADMET分析筛选了从MFETO中鉴定出的黄酮类化合物的药代动力学和物理化学性质。山奈酚和儿茶素符合Lipinski规则,在Protox II中无毒性。这些化合物的靶点来自SwissTarget预测和中药系统药理学数据库(TCMSP),而胰腺癌的靶点则来自基因卡片(GeneCards)和疾病基因网络(DisGeNET)数据库。通过STRING生成共同基因的蛋白质-蛋白质相互作用(PPI)网络,然后导出到Cytoscape以获得前5个枢纽基因(AKT1、SRC、表皮生长因子受体(EGFR)、肿瘤坏死因子(TNF)和半胱天冬酶3(CASP3))。使用分子对接分析化合物与枢纽基因之间的相互作用,它们之间的高结合亲和力可以通过Biovia发现工作室可视化工具进行可视化。我们的研究表明,与胰腺癌相关的五个枢纽基因在肿瘤生长诱导、侵袭和迁移中起重要作用。山奈酚通过清除活性氧(ROS)抑制细胞外信号调节激酶1/2(ERK1/2)、EGFR相关的SRC和AKT途径,有效抑制细胞迁移,而儿茶素通过诱导恶性细胞凋亡抑制TNFα诱导的激活以及细胞周期在G1期和G2/M期的停滞。含有山奈酚和儿茶素的MFETO未来可用于配制治疗胰腺癌的有效药物。