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洞察石英选择性肽的结合机制:迈向更环保的浮选工艺。

Insight into the Binding Mechanisms of Quartz-Selective Peptides: Toward Greener Flotation Processes.

机构信息

Department of Chemical Engineering, Université Laval, 1065 Avenue de la Médecine, Québec, Québec G1V 0A6, Canada.

PROTEO, The Quebec Network for Research on Protein Function, Engineering, and Applications, 1045 Avenue de la Médecine, Québec, Québec G1V 0A6, Canada.

出版信息

ACS Appl Mater Interfaces. 2023 Apr 12;15(14):17922-17937. doi: 10.1021/acsami.3c01275. Epub 2023 Apr 3.

DOI:10.1021/acsami.3c01275
PMID:37010879
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10103053/
Abstract

Mining practices, chiefly froth flotation, are being critically reassessed to replace their use of biohazardous chemical reagents in favor of biofriendly alternatives as a path toward green processes. In this regard, this study aimed at evaluating the interactions of peptides, as potential floatation collectors, with quartz using phage display and molecular dynamics (MD) simulations. Quartz-selective peptide sequences were initially identified by phage display at pH = 9 and further modeled by a robust simulation scheme combining classical MD, replica exchange MD, and steered MD calculations. Our residue-specific analyses of the peptides revealed that positively charged arginine and lysine residues were favorably attracted by the quartz surface at basic pH. The negatively charged residues at pH 9 (i.e., aspartic acid and glutamic acid) further showed affinity toward the quartz surface through electrostatic interactions with the positively charged surface-bound Na ions. The best-binding heptapeptide combinations, however, contained both positively and negatively charged residues in their composition. The flexibility of peptide chains was also shown to directly affect the adsorption behavior of the peptide. While attractive intrapeptide interactions were dominated by a weak peptide-quartz binding, the repulsive self-interactions in the peptides improved the binding propensity to the quartz surface. Our results showed that MD simulations are fully capable of revealing mechanistic details of peptide adsorption to inorganic surfaces and are an invaluable tool to accelerate the rational design of peptide sequences for mineral processing applications.

摘要

采矿作业,主要是浮选,正在受到严格的重新评估,以取代其在生物危害化学试剂中的使用,转而采用生物友好型替代品,作为迈向绿色工艺的途径。在这方面,本研究旨在评估肽(作为潜在浮选捕收剂)与石英之间的相互作用,使用噬菌体展示和分子动力学(MD)模拟。最初在 pH = 9 时通过噬菌体展示鉴定出对石英具有选择性的肽序列,并通过结合经典 MD、复制交换 MD 和导向 MD 计算的强大模拟方案进一步建模。我们对肽的残基特异性分析表明,在碱性 pH 下,带正电荷的精氨酸和赖氨酸残基被石英表面强烈吸引。带负电荷的残基(即天冬氨酸和谷氨酸)在 pH 9 时通过与带正电荷的表面结合的 Na 离子的静电相互作用,进一步显示出对石英表面的亲和力。然而,最佳结合的七肽组合在其组成中既包含带正电荷的残基,也包含带负电荷的残基。肽链的柔韧性也被证明直接影响肽的吸附行为。虽然肽与石英的弱结合主导了肽链内部的吸引力,但肽之间的排斥性自相互作用增强了其与石英表面的结合倾向。我们的研究结果表明,MD 模拟完全能够揭示肽吸附到无机表面的机制细节,是加速用于矿物加工应用的肽序列合理设计的宝贵工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82a3/10103053/5d78e499b113/am3c01275_0009.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82a3/10103053/18acd5bb7104/am3c01275_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82a3/10103053/abd71fb16eaf/am3c01275_0005.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82a3/10103053/a32272343314/am3c01275_0007.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82a3/10103053/5d78e499b113/am3c01275_0009.jpg

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