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三巯基假肽以 AsS 配位环境结合砷(III),模拟蛋白质中类金属结合位点。

Tristhiolato Pseudopeptides Bind Arsenic(III) in an AsS Coordination Environment Imitating Metalloid Binding Sites in Proteins.

机构信息

Department of Inorganic and Analytical Chemistry, University of Szeged, Dóm tér 7, Szeged H-6720, Hungary.

CEA, CNRS, Grenoble INP, IRIG, SyMMES, Universite Grenoble Alpes, Grenoble 38000, France.

出版信息

Inorg Chem. 2023 May 1;62(17):6817-6824. doi: 10.1021/acs.inorgchem.3c00563. Epub 2023 Apr 18.

Abstract

The As binding of two NTA-based tripodal pseudopeptides, possessing three cysteine (ligand ) or d-penicillamine residues (ligand ) as potential coordinating groups for soft semimetals or metal ions, was studied by experimental (UV, CD, NMR, and ESI-MS) and theoretical (DFT) methods. All of the experimental data, obtained with the variation of the As:ligand concentration ratios or pH values in some instances, evidence the exclusive formation of species with an AsS-type coordination mode. The UV-monitored titration of the ligands with arsenous acid at pH = 7.0 provided an absorbance data set that allowed for the determination of apparent stability constants of the forming species. The obtained stabilities (log' = 5.26 (As) and log' = 3.04 (As)) reflect high affinities, especially for the sterically less restricted cysteine derivative. DFT calculated structures correlate well with the spectroscopic results and, in line with the H NMR data, indicate a preference for the all- conformers resembling the As environment at the semimetal binding sites in various metalloproteins.

摘要

通过实验(UV、CD、NMR 和 ESI-MS)和理论(DFT)方法研究了两种基于 NTA 的三足假肽的 As 结合,这些假肽具有三个半胱氨酸(配体)或 D-青霉胺残基(配体)作为软半金属或金属离子的潜在配位基团。在某些情况下,通过改变 As:配体浓度比或 pH 值获得的所有实验数据都证明了仅形成具有 AsS 型配位模式的物种。在 pH = 7.0 时用亚砷酸监测配体的 UV 滴定提供了一组吸光度数据,允许确定形成物种的表观稳定常数。获得的稳定性(log' = 5.26(As)和 log' = 3.04(As))反映了高亲和力,特别是对于空间位阻较小的半胱氨酸衍生物。DFT 计算的结构与光谱结果很好地相关,并与 H NMR 数据一致,表明偏爱类似于各种金属蛋白中半金属结合位点的 As 环境的全构象。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8f14/10155180/2f618abbf4f4/ic3c00563_0007.jpg

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