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计算机模拟 EsxG EsxH 合理表位选择:针对肺结核的疫苗设计候选表位。

In silico EsxG EsxH rational epitope selection: Candidate epitopes for vaccine design against pulmonary tuberculosis.

机构信息

Experimental Pathology Department, Experimental Pathology Laboratory, Instituto Nacional de Ciencias Médicas y Nutrición "Salvador Zubirán", Mexico City, Mexico.

Facultad de Medicina, Pathology Department, Universidad Nacional Autónoma de México, Mexico City, Mexico.

出版信息

PLoS One. 2023 Apr 20;18(4):e0284264. doi: 10.1371/journal.pone.0284264. eCollection 2023.

Abstract

Rational design of new vaccines against pulmonary tuberculosis is imperative. Early secreted antigens (Esx) G and H are involved in metal uptake, drug resistance, and immune response evasion. These characteristics make it an ideal target for rational vaccine development. The aim of this study is to show the rational design of epitope-based peptide vaccines by using bioinformatics and structural vaccinology tools. A total of 4.15 μs of Molecular Dynamics simulations were carried out to describe the behavior in solution of heterodimer, single epitopes, and epitopes loaded into MHC-II complexes. In order to predict T and B cell epitopes for antigenic activation, bioinformatic tools were used. Hence, we propose three epitopes with the potential to design pulmonary tuberculosis vaccines. The possible use of the proposed epitopes includes subunit vaccines, as a booster in BCG vaccination to improve its immune response, as well as the generation of antibodies that interfere with the Mycobacterium tuberculosis homeostasis, affecting its survival.

摘要

针对肺结核的新型疫苗的合理设计势在必行。早期分泌抗原(Esx)G 和 H 参与金属摄取、耐药性和免疫逃逸。这些特性使其成为合理疫苗开发的理想目标。本研究旨在通过生物信息学和结构疫苗学工具展示基于表位的肽疫苗的合理设计。总共进行了 4.15 μs 的分子动力学模拟,以描述异二聚体、单个表位和加载到 MHC-II 复合物中的表位在溶液中的行为。为了预测针对抗原激活的 T 细胞和 B 细胞表位,使用了生物信息学工具。因此,我们提出了三个具有设计肺结核疫苗潜力的表位。所提出的表位的可能用途包括亚单位疫苗,作为卡介苗接种的加强剂,以提高其免疫反应,以及产生干扰分枝杆菌内稳态的抗体,从而影响其存活。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f63a/10118122/d9b5426fc2fe/pone.0284264.g001.jpg

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