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瓦里绝缘子在内源基因转录调控中无明显作用。

No apparent role for the Wari insulator in transcriptional regulation of the endogenous gene of .

作者信息

Born Gordian, Bieli Dimi, Metzler Mario, Gohl Daryl M, Affolter Markus, Müller Martin

机构信息

Biozentrum der Universität Basel, Basel, Switzerland.

Arcondis, Reinach, Switzerland.

出版信息

MicroPubl Biol. 2023 Apr 5;2023. doi: 10.17912/micropub.biology.000702. eCollection 2023.

DOI:10.17912/micropub.biology.000702
PMID:37090157
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10116347/
Abstract

Chromatin insulators have been proposed to play an important role in chromosome organization and local regulatory interactions. In , one of these insulators is known as Wari. It is located immediately downstream of the 3' end of the transcription unit. Wari has been proposed to interact with the promoter region, thereby facilitating recycling of the RNA polymerase machinery. We have tested this model by deleting the Wari insulator at the endogenous locus and could not detect a significant effect on eye pigmentation.

摘要

染色质绝缘子被认为在染色体组织和局部调控相互作用中发挥重要作用。在[具体情况未提及]中,其中一种绝缘子被称为Wari。它位于转录单元3'端的紧邻下游。有人提出Wari与[具体基因]启动子区域相互作用,从而促进RNA聚合酶机制的循环利用。我们通过在内源[基因名称]位点删除Wari绝缘子来测试该模型,并未检测到对眼色素沉着有显著影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f247/10116347/a3a541509909/25789430-2023-micropub.biology.000702.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f247/10116347/a3a541509909/25789430-2023-micropub.biology.000702.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f247/10116347/a3a541509909/25789430-2023-micropub.biology.000702.jpg

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1
No apparent role for the Wari insulator in transcriptional regulation of the endogenous gene of .瓦里绝缘子在内源基因转录调控中无明显作用。
MicroPubl Biol. 2023 Apr 5;2023. doi: 10.17912/micropub.biology.000702. eCollection 2023.
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本文引用的文献

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The RNA Polymerase II Core Promoter in .真核生物中的 RNA 聚合酶 II 核心启动子
Genetics. 2019 May;212(1):13-24. doi: 10.1534/genetics.119.302021.
2
The open for business model of the bithorax complex in Drosophila.果蝇双胸复合体的商业开放模式。
Chromosoma. 2015 Sep;124(3):293-307. doi: 10.1007/s00412-015-0522-0. Epub 2015 Jun 12.
3
Highly specific and efficient CRISPR/Cas9-catalyzed homology-directed repair in Drosophila.果蝇中高度特异性且高效的CRISPR/Cas9催化的同源定向修复
Genetics. 2014 Apr;196(4):961-71. doi: 10.1534/genetics.113.160713. Epub 2014 Jan 29.
4
Chromatin insulators and long-distance interactions in Drosophila.果蝇中的染色质绝缘子和长距离相互作用。
FEBS Lett. 2014 Jan 3;588(1):8-14. doi: 10.1016/j.febslet.2013.10.039. Epub 2013 Nov 5.
5
Insulators form gene loops by interacting with promoters in Drosophila.绝缘子通过与果蝇中的启动子相互作用形成基因环。
Development. 2011 Sep;138(18):4097-106. doi: 10.1242/dev.062836.
6
Transcription initiation from within P elements generates hypomorphic mutations in Drosophila melanogaster.从 P 元件内部转录起始导致果蝇 melanogaster 的功能获得性突变。
Genetics. 2011 Jul;188(3):749-52. doi: 10.1534/genetics.111.129825. Epub 2011 Apr 28.
7
E(y)2/Sus1 is required for blocking PRE silencing by the Wari insulator in Drosophila melanogaster.在黑腹果蝇中,E(y)2/Sus1是通过Wari绝缘子阻断PRE沉默所必需的。
Chromosoma. 2010 Jun;119(3):243-53. doi: 10.1007/s00412-009-0253-1. Epub 2010 Jan 15.
8
2010: A century of Drosophila genetics through the prism of the white gene.2010:从白眼基因看果蝇遗传学的一个世纪
Genetics. 2010 Jan;184(1):3-7. doi: 10.1534/genetics.109.110015.
9
Red flag on the white reporter: a versatile insulator abuts the white gene in Drosophila and is omnipresent in mini-white constructs.白色报告基因上的红色标记:一种多功能绝缘子毗邻果蝇中的白色基因,且在微型白色基因构建体中普遍存在。
Nucleic Acids Res. 2008 Feb;36(3):929-37. doi: 10.1093/nar/gkm992. Epub 2007 Dec 17.
10
FB elements can promote exon shuffling: a promoter-less white allele can be reactivated by FB mediated transposition in Drosophila melanogaster.FB元件可促进外显子改组:在黑腹果蝇中,一个无启动子的白色等位基因可通过FB介导的转座作用而重新激活。
Mol Genet Genomics. 2004 May;271(4):394-401. doi: 10.1007/s00438-004-1007-7. Epub 2004 Apr 2.