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基于CT的放射组学和基因组学整合模型用于接受根治性放化疗的食管癌患者的生存预测

Model integrating CT-based radiomics and genomics for survival prediction in esophageal cancer patients receiving definitive chemoradiotherapy.

作者信息

Cui Jinfeng, Li Li, Liu Ning, Hou Wenhong, Dong Yinjun, Yang Fengchang, Zhu Shouhui, Li Jun, Yuan Shuanghu

机构信息

Center for Medical Integration and Practice, Shandong University, Jinan, Shandong, China.

Department of Radiation Oncology, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Shandong Cancer Hospital Affiliated to Shandong First Medical University, Jinan, Shandong, China.

出版信息

Biomark Res. 2023 Apr 24;11(1):44. doi: 10.1186/s40364-023-00480-x.


DOI:10.1186/s40364-023-00480-x
PMID:37095586
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10127317/
Abstract

BACKGROUND: Definitive chemoradiotherapy (dCRT) is a standard treatment option for locally advanced stage inoperable esophageal squamous cell carcinoma (ESCC). Evaluating clinical outcome prior to dCRT remains challenging. This study aimed to investigate the predictive power of computed tomography (CT)-based radiomics combined with genomics for the treatment efficacy of dCRT in ESCC patients. METHODS: This retrospective study included 118 ESCC patients who received dCRT. These patients were randomly divided into training (n = 82) and validation (n = 36) groups. Radiomic features were derived from the region of the primary tumor on CT images. Least absolute shrinkage and selection operator (LASSO) regression was conducted to select optimal radiomic features, and Rad-score was calculated to predict progression-free survival (PFS) in training group. Genomic DNA was extracted from formalin-fixed and paraffin-embedded pre-treatment biopsy tissue. Univariate and multivariate Cox analyses were undertaken to identify predictors of survival for model development. The area under the receiver operating characteristic curve (AUC) and C-index were used to evaluate the predictive performance and discriminatory ability of the prediction models, respectively. RESULTS: The Rad-score was constructed from six radiomic features to predict PFS. Multivariate analysis demonstrated that the Rad-score and homologous recombination repair (HRR) pathway alterations were independent prognostic factors correlating with PFS. The C-index for the integrated model combining radiomics and genomics was better than that of the radiomics or genomics models in the training group (0.616 vs. 0.587 or 0.557) and the validation group (0.649 vs. 0.625 or 0.586). CONCLUSION: The Rad-score and HRR pathway alterations could predict PFS after dCRT for patients with ESCC, with the combined radiomics and genomics model demonstrating the best predictive efficacy.

摘要

背景:确定性放化疗(dCRT)是局部晚期不可切除食管鳞状细胞癌(ESCC)的标准治疗选择。在dCRT之前评估临床结局仍然具有挑战性。本研究旨在探讨基于计算机断层扫描(CT)的放射组学联合基因组学对ESCC患者dCRT治疗疗效的预测能力。 方法:这项回顾性研究纳入了118例接受dCRT的ESCC患者。这些患者被随机分为训练组(n = 82)和验证组(n = 36)。从CT图像上的原发肿瘤区域提取放射组学特征。采用最小绝对收缩和选择算子(LASSO)回归来选择最佳放射组学特征,并计算Rad评分以预测训练组的无进展生存期(PFS)。从福尔马林固定石蜡包埋的治疗前活检组织中提取基因组DNA。进行单因素和多因素Cox分析以确定模型开发的生存预测因子。分别使用受试者操作特征曲线(ROC)下面积(AUC)和C指数来评估预测模型的预测性能和鉴别能力。 结果:基于六个放射组学特征构建了Rad评分以预测PFS。多因素分析表明,Rad评分和同源重组修复(HRR)途径改变是与PFS相关的独立预后因素。在训练组(0.616对0.587或0.557)和验证组(0.649对0.625或0.586)中,联合放射组学和基因组学的综合模型的C指数优于放射组学或基因组学模型。 结论:Rad评分和HRR途径改变可以预测ESCC患者dCRT后的PFS,联合放射组学和基因组学模型显示出最佳的预测疗效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/98849739fea0/40364_2023_480_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/15ab32dfef8e/40364_2023_480_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/b8f79dcdabfc/40364_2023_480_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/4ca726ca1fce/40364_2023_480_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/835c5b43cbf7/40364_2023_480_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/a51c457e429c/40364_2023_480_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/98849739fea0/40364_2023_480_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/15ab32dfef8e/40364_2023_480_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/b8f79dcdabfc/40364_2023_480_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/4ca726ca1fce/40364_2023_480_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/835c5b43cbf7/40364_2023_480_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/a51c457e429c/40364_2023_480_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3e8/10127317/98849739fea0/40364_2023_480_Fig6_HTML.jpg

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[4]
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[8]
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本文引用的文献

[1]
Clinical Outcome-Related Cancer Pathways and Mutational Signatures in Patients With Unresectable Esophageal Squamous Cell Carcinoma Treated With Chemoradiotherapy.

Int J Radiat Oncol Biol Phys. 2023-2-1

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CT-based radiomics nomogram may predict local recurrence-free survival in esophageal cancer patients receiving definitive chemoradiation or radiotherapy: A multicenter study.

Radiother Oncol. 2022-9

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Front Oncol. 2020-8-11

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Radiogenomics-based cancer prognosis in colorectal cancer.

Sci Rep. 2019-7-5

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