Zhong Guannan, Wang Zong-Jie, Yan Fu, Zhang Youming, Huo Liujie
Helmholtz International Laboratory for Anti-Infectives, State Key Laboratory of Microbial Technology, Shandong University, Qingdao 266237, China.
Suzhou Research Institute, Shandong University, Suzhou, Jiangsu 215123, P. R. China.
ACS Bio Med Chem Au. 2022 Dec 21;3(1):1-31. doi: 10.1021/acsbiomedchemau.2c00062. eCollection 2023 Feb 15.
Ribosomally synthesized and post-translationally modified peptides (RiPPs) are of increasing interest in natural products as well as drug discovery. This empowers not only the unique chemical structures and topologies in natural products but also the excellent bioactivities such as antibacteria, antifungi, antiviruses, and so on. Advances in genomics, bioinformatics, and chemical analytics have promoted the exponential increase of RiPPs as well as the evaluation of biological activities thereof. Furthermore, benefiting from their relatively simple and conserved biosynthetic logic, RiPPs are prone to be engineered to obtain diverse analogues that exhibit distinct physiological activities and are difficult to synthesize. This Review aims to systematically address the variety of biological activities and/or the mode of mechanisms of novel RiPPs discovered in the past decade, albeit the characteristics of selective structures and biosynthetic mechanisms are briefly covered as well. Almost one-half of the cases are involved in anti-Gram-positive bacteria. Meanwhile, an increasing number of RiPPs related to anti-Gram-negative bacteria, antitumor, antivirus, etc., are also discussed in detail. Last but not least, we sum up some disciplines of the RiPPs' biological activities to guide genome mining as well as drug discovery and optimization in the future.
核糖体合成及翻译后修饰肽(RiPPs)在天然产物以及药物发现领域越来越受到关注。这不仅赋予了天然产物独特的化学结构和拓扑结构,还赋予了其诸如抗菌、抗真菌、抗病毒等优异的生物活性。基因组学、生物信息学和化学分析的进展推动了RiPPs数量呈指数增长及其生物活性评估。此外,得益于其相对简单且保守的生物合成逻辑,RiPPs易于进行工程改造以获得具有不同生理活性且难以合成的多样类似物。本综述旨在系统阐述过去十年中发现的新型RiPPs的各种生物活性和/或作用机制模式,尽管也简要涵盖了其选择性结构和生物合成机制的特点。几乎一半的案例涉及抗革兰氏阳性菌。同时,也详细讨论了越来越多与抗革兰氏阴性菌、抗肿瘤、抗病毒等相关的RiPPs。最后但同样重要的是,我们总结了一些RiPPs生物活性的规律,以指导未来的基因组挖掘以及药物发现和优化。