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亚洲鲤科鱼类的染色体:“原魮亚科”(硬骨鱼纲,鲤科)保守核型中的基因组差异

Chromosomes of Asian Cyprinid Fishes: Genomic Differences in Conserved Karyotypes of 'Poropuntiinae' (Teleostei, Cyprinidae).

作者信息

Khensuwan Sudarat, Sassi Francisco de M C, Moraes Renata L R, Jantarat Sitthisak, Seetapan Kriengkrai, Phintong Krit, Thongnetr Weera, Kaewsri Sarawut, Jumrusthanasan Sarun, Supiwong Weerayuth, Rab Petr, Tanomtong Alongklod, Liehr Thomas, Cioffi Marcelo B

机构信息

Department of Biology, Faculty of Science, Khon Kaen University, Muang, Khon Kaen 40002, Thailand.

Departamento de Genética e Evolução, Universidade Federal de São Carlos (UFSCar), Rodovia Washington Luiz Km. 235, C.P. 676, São Carlos 13565-905, Brazil.

出版信息

Animals (Basel). 2023 Apr 20;13(8):1415. doi: 10.3390/ani13081415.

Abstract

The representatives of cyprinid lineage 'Poropuntiinae' with 16 recognized genera and around 100 species form a significant part of Southeast Asian ichthyofauna. Cytogenetics are valuable when studying fish evolution, especially the dynamics of repetitive DNAs, such as ribosomal DNAs (5S and 18S) and microsatellites, that can vary between species. Here, karyotypes of seven 'poropuntiin' species, namely , , , , , , and occurring in Thailand were examined using conventional and molecular cytogenetic protocols. Variable numbers of uni- and bi-armed chromosomes indicated widespread chromosome rearrangements with a stable diploid chromosome number (2n) of 50. Examination with fluorescence in situ hybridization using major and minor ribosomal probes showed that , , and all had one chromosomal pair with 5S rDNA sites. However, more than two sites were found in , , , and . The number of chromosomes with 18S rDNA sites varied amongst their karyotypes from one to three; additionally, comparative genomic hybridization and microsatellite patterns varied among species. Our results reinforce the trend of chromosomal evolution in cyprinifom fishes, with major chromosomal rearrangements, while conserving their 2n.

摘要

鲤科“原缨口鳅亚科”的代表物种有16个已确认的属和约100个物种,是东南亚鱼类区系的重要组成部分。细胞遗传学在研究鱼类进化时很有价值,特别是在研究重复DNA的动态变化时,比如核糖体DNA(5S和18S)和微卫星,它们在不同物种之间可能会有所不同。在此,我们使用传统和分子细胞遗传学方法,对泰国境内的七种“原缨口鳅属”物种,即[此处原文缺失物种名]的核型进行了研究。单臂和双臂染色体数量的变化表明存在广泛的染色体重排现象,而其二倍体染色体数(2n)稳定为50。使用主要和次要核糖体探针进行荧光原位杂交检测发现,[此处原文缺失物种名]均有一对带有5S rDNA位点的染色体。然而,在[此处原文缺失物种名]中发现了两个以上的位点。带有18S rDNA位点的染色体数量在它们的核型中从一条到三条不等;此外,比较基因组杂交和微卫星模式在不同物种之间也存在差异。我们的研究结果强化了鲤形目鱼类染色体重排但保留2n的染色体进化趋势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bb4/10135121/84ad1e85e443/animals-13-01415-g001.jpg

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