Suppr超能文献

海洋拟杆菌通过酶解作用来消化陆地植物中的木聚糖。

Marine Bacteroidetes enzymatically digest xylans from terrestrial plants.

机构信息

Department of Biotechnology & Enzyme Catalysis, Institute of Biochemistry, University Greifswald, Greifswald, Germany.

Department of Pharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany.

出版信息

Environ Microbiol. 2023 Sep;25(9):1713-1727. doi: 10.1111/1462-2920.16390. Epub 2023 Apr 30.

Abstract

Marine Bacteroidetes that degrade polysaccharides contribute to carbon cycling in the ocean. Organic matter, including glycans from terrestrial plants, might enter the oceans through rivers. Whether marine bacteria degrade structurally related glycans from diverse sources including terrestrial plants and marine algae was previously unknown. We show that the marine bacterium Flavimarina sp. Hel_I_48 encodes two polysaccharide utilization loci (PULs) which degrade xylans from terrestrial plants and marine algae. Biochemical experiments revealed activity and specificity of the encoded xylanases and associated enzymes of these PULs. Proteomics indicated that these genomic regions respond to glucuronoxylans and arabinoxylans. Substrate specificities of key enzymes suggest dedicated metabolic pathways for xylan utilization. Some of the xylanases were active on different xylans with the conserved β-1,4-linked xylose main chain. Enzyme activity was consistent with growth curves showing Flavimarina sp. Hel_I_48 uses structurally different xylans. The observed abundance of related xylan-degrading enzyme repertoires in genomes of other marine Bacteroidetes indicates similar activities are common in the ocean. The here presented data show that certain marine bacteria are genetically and biochemically variable enough to access parts of structurally diverse xylans from terrestrial plants as well as from marine algal sources.

摘要

海洋拟杆菌门中的细菌能降解多糖,有助于海洋中的碳循环。有机物,包括陆地植物来源的糖,可能通过河流进入海洋。海洋细菌是否能从包括陆地植物和海洋藻类在内的各种来源中降解结构相关的糖,以前并不清楚。我们发现海洋细菌 Flavimarina sp. Hel_I_48 编码两个多糖利用基因座(PUL),能降解陆地植物和海洋藻类来源的木聚糖。生化实验揭示了这些 PUL 编码的木聚糖酶及其相关酶的活性和特异性。蛋白质组学研究表明,这些基因组区域对葡萄糖醛酸木聚糖和阿拉伯木聚糖有反应。关键酶的底物特异性表明存在专门的木聚糖代谢途径。一些木聚糖酶能作用于具有保守的β-1,4-连接木糖主链的不同木聚糖。酶活性与生长曲线一致,表明 Flavimarina sp. Hel_I_48 能利用结构不同的木聚糖。其他海洋拟杆菌门基因组中类似的木聚糖降解酶基因序列的丰富度表明,类似的活性在海洋中很常见。本研究结果表明,某些海洋细菌在基因和生化上具有足够的多样性,可以从陆地植物和海洋藻类来源中获取结构多样的木聚糖的部分结构。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验