Suppr超能文献

在磷脂酰胆碱-胆固醇膜中的分配:脂质体测量、粗粒化模拟以及对生物积累的影响。

Partitioning into phosphatidylcholine-cholesterol membranes: liposome measurements, coarse-grained simulations, and implications for bioaccumulation.

机构信息

Department of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom.

Safety and Environmental Assurance Centre, Unilever, Colworth Science Park, Sharnbrook, Bedfordshire MK44 1LQ, United Kingdom.

出版信息

Environ Sci Process Impacts. 2023 Jun 21;25(6):1082-1093. doi: 10.1039/d3em00081h.

Abstract

Membrane-water partitioning is an important physical property for the assessment of bioaccumulation and environmental impact. Here, we advance simulation methodology for predicting the partitioning of small molecules into lipid membranes and compare the computational predictions to experimental measurements in liposomes. As a step towards high-throughput screening, we present an automated mapping and parametrization procedure to produce coarse-grained models compatible with the Martini 3 force field. The methodology is general and can also be used for other applications where coarse-grained simulations are appropriate. This article addresses the effect on membrane-water partitioning of adding cholesterol to POPC (1-palmitoyl-2-oleoyl--glycero-3-phosphocholine) membranes. Nine contrasting neutral, zwitterionic and charged solutes are tested. Agreement between experiment and simulation is generally good, with the most challenging cases being permanently charged solutes. For all solutes, partitioning is found to be insensitive to membrane cholesterol concentration up to 25% mole fraction. Hence, for assessment of bioaccumulation into a range of membranes (such as those found in fish), partitioning data measured in pure lipid membranes are still informative.

摘要

膜-水分配是评估生物蓄积和环境影响的一个重要物理性质。在这里,我们提出了一种预测小分子分配到脂质膜中的模拟方法,并将计算预测与脂质体中的实验测量进行了比较。作为高通量筛选的一个步骤,我们提出了一种自动映射和参数化的程序,以产生与 Martini 3 力场兼容的粗粒模型。该方法具有通用性,也可用于其他需要粗粒模拟的应用。本文研究了向 POPC(1-棕榈酰-2-油酰-甘油-3-磷酸胆碱)膜中添加胆固醇对膜-水分配的影响。测试了九种具有对比性的中性、两性离子和带电溶质。实验与模拟的一致性通常很好,最具挑战性的情况是带永久电荷的溶质。对于所有溶质,分配对膜胆固醇浓度高达 25%摩尔分数的变化不敏感。因此,对于评估进入一系列膜(如鱼类中发现的膜)的生物蓄积,在纯脂质膜中测量的分配数据仍然具有信息性。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验