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基于深度学习的荧光寿命分析在光饥饿 STED 成像中提高空间分辨率。

Spatial resolution enhancement in photon-starved STED imaging using deep learning-based fluorescence lifetime analysis.

机构信息

Biomedical Engineering, University of Texas at Austin, Austin, TX, USA.

ISS, Inc., 1602 Newton Drive, Champaign, IL, 61822, USA.

出版信息

Nanoscale. 2023 Jun 1;15(21):9449-9456. doi: 10.1039/d3nr00305a.

DOI:10.1039/d3nr00305a
PMID:37159237
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10460507/
Abstract

As a super-resolution imaging method, stimulated emission depletion (STED) microscopy has unraveled fine intracellular structures and provided insights into nanoscale organizations in cells. Although image resolution can be further enhanced by continuously increasing the STED-beam power, the resulting photodamage and phototoxicity are major issues for real-world applications of STED microscopy. Here we demonstrate that, with 50% less STED-beam power, the STED image resolution can be improved up to 1.45-fold using the separation of photons by a lifetime tuning (SPLIT) scheme combined with a deep learning-based phasor analysis algorithm termed (fluorescence lifetime imaging based on a generative adversarial network). This work offers a new approach for STED imaging in situations where only a limited photon budget is available.

摘要

作为一种超分辨率成像方法,受激发射耗尽(STED)显微镜已经揭示了精细的细胞内结构,并提供了对细胞中纳米尺度组织的深入了解。尽管可以通过不断增加 STED 光束功率来进一步提高图像分辨率,但由此产生的光损伤和光毒性是 STED 显微镜实际应用中的主要问题。在这里,我们证明,通过使用通过寿命调谐(SPLIT)方案分离光子,并结合基于深度学习的相量分析算法(基于生成对抗网络的荧光寿命成像),可以在 STED 光束功率降低 50%的情况下,将 STED 图像分辨率提高高达 1.45 倍。这项工作为仅可用有限光子预算的 STED 成像提供了一种新方法。

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本文引用的文献

1
Synergizing Exchangeable Fluorophore Labels for Multitarget STED Microscopy.协同可交换荧光团标签用于多靶点 STED 显微镜。
ACS Nano. 2022 Nov 22;16(11):17991-17997. doi: 10.1021/acsnano.2c07212. Epub 2022 Oct 12.
2
Stimulated emission depletion microscopy with a single depletion laser using five fluorochromes and fluorescence lifetime phasor separation.使用单束耗尽激光的受激发射损耗显微镜和五种荧光染料以及荧光寿命相分离。
Sci Rep. 2022 Aug 18;12(1):14027. doi: 10.1038/s41598-022-17825-5.
3
Generative adversarial network enables rapid and robust fluorescence lifetime image analysis in live cells.
利用脉冲交错激发光谱 FLIM 在活细胞中进行多重成像。
Opt Express. 2024 Jan 29;32(3):3290-3307. doi: 10.1364/OE.505667.
生成对抗网络使活细胞中的荧光寿命图像分析快速而稳健。
Commun Biol. 2022 Jan 11;5(1):18. doi: 10.1038/s42003-021-02938-w.
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Engineered HaloTag variants for fluorescence lifetime multiplexing.用于荧光寿命多重检测的工程 HaloTag 变体。
Nat Methods. 2022 Jan;19(1):65-70. doi: 10.1038/s41592-021-01341-x. Epub 2021 Dec 16.
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Complex wavelet filter improves FLIM phasors for photon starved imaging experiments.复小波滤波器改善了用于光子饥饿成像实验的荧光寿命成像(FLIM)相量。
Biomed Opt Express. 2021 May 17;12(6):3463-3473. doi: 10.1364/BOE.420953. eCollection 2021 Jun 1.
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Super-resolution STED microscopy in live brain tissue.活脑组织中的超高分辨率 STED 显微镜。
Neurobiol Dis. 2021 Aug;156:105420. doi: 10.1016/j.nbd.2021.105420. Epub 2021 Jun 5.
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High-speed compressed-sensing fluorescence lifetime imaging microscopy of live cells.高速压缩感知荧光寿命成像显微镜活细胞。
Proc Natl Acad Sci U S A. 2021 Jan 19;118(3). doi: 10.1073/pnas.2004176118.
8
Mitochondrial dynamics quantitatively revealed by STED nanoscopy with an enhanced squaraine variant probe.STED 纳米显微镜技术定量揭示增强型方酸变体探针的线粒体动力学。
Nat Commun. 2020 Jul 24;11(1):3699. doi: 10.1038/s41467-020-17546-1.
9
A photostable fluorescent marker for the superresolution live imaging of the dynamic structure of the mitochondrial cristae.一种用于超分辨活细胞成像线粒体嵴动态结构的光稳定荧光标记物。
Proc Natl Acad Sci U S A. 2019 Aug 6;116(32):15817-15822. doi: 10.1073/pnas.1905924116. Epub 2019 Jul 23.
10
Fight against background noise in stimulated emission depletion nanoscopy.抗背景噪声的受激发射耗散纳米显微镜。
Phys Biol. 2019 Jul 5;16(5):051002. doi: 10.1088/1478-3975/ab255c.