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生物物理和生物化学研究支持 TP0094 作为苍白密螺旋体产乙酸能保守途径中的磷酸转乙酰酶。

Biophysical and biochemical studies support TP0094 as a phosphotransacetylase in an acetogenic energy-conservation pathway in Treponema pallidum.

机构信息

Department of Biophysics, UT Southwestern Medical Center, Dallas, Texas, United States of America.

Department of Microbiology, UT Southwestern Medical Center, Dallas, Texas, United States of America.

出版信息

PLoS One. 2023 May 18;18(5):e0283952. doi: 10.1371/journal.pone.0283952. eCollection 2023.

DOI:10.1371/journal.pone.0283952
PMID:37200262
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10194888/
Abstract

The mechanisms of energy generation and carbon-source utilization in the syphilis spirochete Treponema pallidum have remained enigmatic despite complete genomic sequence information. Whereas the bacterium harbors enzymes for glycolysis, the apparatus for more efficient use of glucose catabolites, namely the citric-acid cycle, is apparently not present. Yet, the organism's energy needs likely exceed the modest output from glycolysis alone. Recently, building on our structure-function studies of T. pallidum lipoproteins, we proposed a "flavin-centric" metabolic lifestyle for the organism that partially resolves this conundrum. As a part of the hypothesis, we have proposed that T. pallidum contains an acetogenic energy-conservation pathway that catabolizes D-lactate, yielding acetate, reducing equivalents for the generation and maintenance of chemiosmotic potential, and ATP. We already have confirmed the D-lactate dehydrogenase activity in T. pallidum necessary for this pathway to operate. In the current study, we focused on another enzyme ostensibly involved in treponemal acetogenesis, phosphotransacetylase (Pta). This enzyme is putatively identified as TP0094 and, in this study, we determined a high-resolution (1.95 Å) X-ray crystal structure of the protein, finding that its fold comports with other known Pta enzymes. Further studies on its solution behavior and enzyme activity confirmed that it has the properties of a Pta. These results are consistent with the proposed acetogenesis pathway in T. pallidum, and we propose that the protein be referred to henceforth as TpPta.

摘要

尽管梅毒螺旋体苍白密螺旋体的完整基因组序列信息已经公布,但能量产生和碳源利用的机制仍然是个谜。尽管该细菌含有糖酵解酶,但显然不存在更有效地利用葡萄糖分解产物(即柠檬酸循环)的装置。然而,该生物体的能量需求可能超过糖酵解单独产生的适度输出。最近,基于我们对苍白密螺旋体脂蛋白的结构-功能研究,我们提出了一种该生物体的“黄素中心”代谢生活方式,部分解决了这个难题。作为假设的一部分,我们提出苍白密螺旋体含有一种产乙酸能的能量守恒途径,该途径可代谢 D-乳酸,生成乙酸盐、还原当量,用于产生和维持化学渗透势和 ATP。我们已经证实了苍白密螺旋体中进行该途径所需的 D-乳酸脱氢酶活性。在当前的研究中,我们专注于另一种显然与密螺旋体产乙酸有关的酶,磷酸转乙酰酶(Pta)。该酶被推测为 TP0094,在本研究中,我们确定了该蛋白的高分辨率(1.95Å)X 射线晶体结构,发现其折叠与其他已知的 Pta 酶一致。进一步研究其溶液行为和酶活性证实,它具有 Pta 的特性。这些结果与苍白密螺旋体中提出的产乙酸途径一致,我们建议将该蛋白命名为 TpPta。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/583f652bbc15/pone.0283952.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/b58375886bc5/pone.0283952.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/141a85377ed9/pone.0283952.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/832fde9fa4f8/pone.0283952.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/974524817f85/pone.0283952.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/3f6af2f8ce0d/pone.0283952.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/583f652bbc15/pone.0283952.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/b58375886bc5/pone.0283952.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/141a85377ed9/pone.0283952.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/832fde9fa4f8/pone.0283952.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/974524817f85/pone.0283952.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/3f6af2f8ce0d/pone.0283952.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bb7/10194888/583f652bbc15/pone.0283952.g006.jpg

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