Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139,USA.
J Ind Microbiol Biotechnol. 2023 Feb 17;50(1). doi: 10.1093/jimb/kuad013.
Recent work in biosensors has shown promise to enable high throughput searches through large genetic libraries. However, just as physiological limitations and lack of in-depth mechanistic knowledge can prevent us from achieving high titers in microbial systems; similar roadblocks can appear in the application of biosensors. Here, we characterized a previously developed transcription-factor (ExuR) based galacturonate biosensor for its other cognate ligand, glucuronate. Though we saw an ideal response to glucuronate from the biosensor in controlled and ideal experimental circumstances, these results began to deviate from a well-behaved system when we explored the application of the sensor to different MIOX homologs. Through modifications to circuit architecture and culture conditions, we were able to decrease this variation and use these more optimal conditions to apply the biosensor for the separation of two closely related MIOX homologs.
ONE-SENTENCE SUMMARY: In this work, a transcription-factor biosensor was investigated for its potential to screen a library of myo -inositol oxygenase variants while seeking to mitigate the impact the production pathway appeared to have on the biosensor.
最近的生物传感器研究工作显示出了在高通量筛选大型基因文库方面的应用前景。然而,正如生理限制和缺乏深入的机制知识可能会阻止我们在微生物系统中实现高滴度一样;在生物传感器的应用中也可能会出现类似的障碍。在这里,我们对之前开发的基于转录因子(ExuR)的半乳糖酸生物传感器进行了表征,以研究其对其他同源配体葡萄糖醛酸的响应。尽管我们在受控和理想的实验环境中看到了生物传感器对葡萄糖醛酸的理想响应,但当我们将传感器应用于不同的 MIOX 同源物时,这些结果开始偏离一个表现良好的系统。通过对电路结构和培养条件的修改,我们能够减少这种变化,并利用这些更优化的条件将生物传感器应用于两种密切相关的 MIOX 同源物的分离。
在这项工作中,研究了一种转录因子生物传感器,以评估其在筛选肌醇氧化酶变体文库时的潜力,同时试图减轻生物传感器的产生途径对其产生的影响。