Suppr超能文献

对病毒至关重要的:无序蛋白质。

Vital for Viruses: Intrinsically Disordered Proteins.

机构信息

Department of Integrative Structural and Computational Biology and Skaggs Institute of Chemical Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.

出版信息

J Mol Biol. 2023 Jun 1;435(11):167860. doi: 10.1016/j.jmb.2022.167860. Epub 2023 Jun 16.

Abstract

Viruses infect all kingdoms of life; their genomes vary from DNA to RNA and in size from 2kB to 1 MB or more. Viruses frequently employ disordered proteins, that is, protein products of virus genes that do not themselves fold into independent three-dimensional structures, but rather, constitute a versatile molecular toolkit to accomplish a range of functions necessary for viral infection, assembly, and proliferation. Interestingly, disordered proteins have been discovered in almost all viruses so far studied, whether the viral genome consists of DNA or RNA, and whatever the configuration of the viral capsid or other outer covering. In this review, I present a wide-ranging set of stories illustrating the range of functions of IDPs in viruses. The field is rapidly expanding, and I have not tried to include everything. What is included is meant to be a survey of the variety of tasks that viruses accomplish using disordered proteins.

摘要

病毒感染所有生命领域;它们的基因组从 DNA 到 RNA 不等,大小从 2kb 到 1MB 或更大。病毒经常使用无序蛋白,即病毒基因的蛋白质产物本身不会折叠成独立的三维结构,而是构成了一种通用的分子工具包,用于完成一系列对病毒感染、组装和增殖必不可少的功能。有趣的是,迄今为止研究过的几乎所有病毒都发现了无序蛋白,无论病毒基因组是由 DNA 还是 RNA 组成,以及病毒衣壳或其他外壳的结构如何。在这篇综述中,我展示了一系列广泛的故事,说明了 IDP 在病毒中的一系列功能。该领域正在迅速发展,我并没有试图囊括所有内容。本文所包含的内容旨在概述病毒使用无序蛋白完成的各种任务。

相似文献

1
Vital for Viruses: Intrinsically Disordered Proteins.
J Mol Biol. 2023 Jun 1;435(11):167860. doi: 10.1016/j.jmb.2022.167860. Epub 2023 Jun 16.
2
Nucleic acid packaging in viruses.
Curr Opin Struct Biol. 2012 Feb;22(1):65-71. doi: 10.1016/j.sbi.2011.11.002. Epub 2012 Jan 23.
3
Multiple layers of chimerism in a single-stranded DNA virus discovered by deep sequencing.
Genome Biol Evol. 2015 Apr 2;7(4):993-1001. doi: 10.1093/gbe/evv034.
4
Viral genome organization.
Adv Protein Chem. 2003;64:219-58. doi: 10.1016/s0065-3233(03)01006-4.
5
Deep Recombination: RNA and ssDNA Virus Genes in DNA Virus and Host Genomes.
Annu Rev Virol. 2015 Nov;2(1):203-17. doi: 10.1146/annurev-virology-100114-055127. Epub 2015 Sep 2.
6
What does structure tell us about virus evolution?
Curr Opin Struct Biol. 2005 Dec;15(6):655-63. doi: 10.1016/j.sbi.2005.10.012. Epub 2005 Nov 3.
7
Networks of evolutionary interactions underlying the polyphyletic origin of ssDNA viruses.
Curr Opin Virol. 2013 Oct;3(5):578-86. doi: 10.1016/j.coviro.2013.06.010. Epub 2013 Jul 10.
8
Molecular Recognition Features in Zika Virus Proteome.
J Mol Biol. 2018 Aug 3;430(16):2372-2388. doi: 10.1016/j.jmb.2017.10.018. Epub 2017 Nov 7.
10
[Replication strategies of viruses].
Nihon Rinsho. 2003 Mar;61 Suppl 3:451-7.

引用本文的文献

1
Evolution of specialized toxin arsenals in a bacterial symbiont of arthropods.
ISME J. 2025 Jan 2;19(1). doi: 10.1093/ismejo/wraf174.
2
Phosphorylation enables allosteric control of a viral condensate.
bioRxiv. 2025 May 24:2025.05.24.655949. doi: 10.1101/2025.05.24.655949.
3
Challenges in simulating whole virus particles and how to fix them with the SIRAH force field.
Biophys Rev. 2025 Mar 22;17(2):285-292. doi: 10.1007/s12551-025-01305-x. eCollection 2025 Apr.
5
Protein disorder - function paradigm: Putative role in inflammation.
Bioinformation. 2025 Feb 28;21(2):169-172. doi: 10.6026/973206300210169. eCollection 2025.
6
Structural Model of Bacteriophage P22 Scaffolding Protein in a Procapsid by Magic-Angle Spinning NMR.
bioRxiv. 2024 Nov 1:2024.11.01.621488. doi: 10.1101/2024.11.01.621488.

本文引用的文献

2
Lighting up Nobel Prize-winning studies with protein intrinsic disorder.
Cell Mol Life Sci. 2022 Jul 26;79(8):449. doi: 10.1007/s00018-022-04468-y.
3
Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure. 2022 Sep 1;30(9):1340-1353.e3. doi: 10.1016/j.str.2022.05.019. Epub 2022 Jun 17.
4
Role of structural disorder in the multi-functionality of flavivirus proteins.
Expert Rev Proteomics. 2022 Mar;19(3):183-196. doi: 10.1080/14789450.2022.2085563. Epub 2022 Jun 7.
5
Herpesvirus Replication Compartments: Dynamic Biomolecular Condensates?
Viruses. 2022 May 4;14(5):960. doi: 10.3390/v14050960.
7
SARS-CoV-2 variants preferentially emerge at intrinsically disordered protein sites helping immune evasion.
FEBS J. 2022 Jul;289(14):4240-4250. doi: 10.1111/febs.16379. Epub 2022 Feb 15.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验