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核糖开关作为治疗靶点:抗生素新时代的曙光。

Riboswitches as therapeutic targets: promise of a new era of antibiotics.

机构信息

Single Molecule Analysis Group and Center for RNA Biomedicine, Department of Chemistry, University of Michigan, Ann Arbor, MI, USA.

出版信息

Expert Opin Ther Targets. 2023 Jan-Jun;27(6):433-445. doi: 10.1080/14728222.2023.2230363. Epub 2023 Jul 6.

DOI:10.1080/14728222.2023.2230363
PMID:37364239
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10527229/
Abstract

INTRODUCTION

The growth of antibiotic resistance among bacterial pathogens is an impending global threat that can only be averted through the development of novel antibacterial drugs. A promising answer could be the targeting of riboswitches, structured RNA elements found almost exclusively in bacteria.

AREAS COVERED

This review examines the potential of riboswitches as novel antibacterial drug targets. The limited mechanisms of action of currently available antibiotics are summarized, followed by a delineation of the functional mechanisms of riboswitches. We then discuss the potential for developing novel approaches that target paradigmatic riboswitches in the context of their bacterial gene expression machinery.

EXPERT OPINION

We highlight potential advantages of targeting riboswitches in their functional form, embedded within gene expression complexes critical for bacterial survival. We emphasize the benefits of this approach, including potentially higher species specificity and lower side effects.

摘要

简介

细菌病原体对抗生素耐药性的增长是一个迫在眉睫的全球威胁,只能通过开发新型抗菌药物来避免。一个有希望的答案可能是针对核糖开关,这是一种仅在细菌中发现的结构 RNA 元件。

涵盖领域

本文综述了核糖开关作为新型抗菌药物靶点的潜力。总结了现有抗生素作用机制的局限性,接着阐述了核糖开关的功能机制。然后讨论了在细菌基因表达机制的背景下针对典范核糖开关开发新型方法的潜力。

专家意见

我们强调了以功能形式靶向核糖开关的潜在优势,这些核糖开关嵌入对细菌生存至关重要的基因表达复合物中。我们强调了这种方法的好处,包括可能具有更高的物种特异性和更低的副作用。

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本文引用的文献

1
Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand.细菌 RNA 聚合酶暂停的核糖开关及其配体的结构基础。
Nat Struct Mol Biol. 2023 Jul;30(7):902-913. doi: 10.1038/s41594-023-01002-x. Epub 2023 Jun 1.
2
Targeting TPP Riboswitches Using Chimeric Antisense Oligonucleotide Technology for Antibacterial Drug Development.利用嵌合反义寡核苷酸技术靶向硫胺素焦磷酸核糖开关用于抗菌药物开发
ACS Appl Bio Mater. 2022 Sep 28. doi: 10.1021/acsabm.2c00628.
3
A Riboswitch-Driven Era of New Antibacterials.核糖开关驱动的新型抗菌药物时代。
Antibiotics (Basel). 2022 Sep 13;11(9):1243. doi: 10.3390/antibiotics11091243.
4
Bioinformatics and Genomic Analyses of the Suitability of Eight Riboswitches for Antibacterial Drug Targets.八种核糖开关作为抗菌药物靶点适用性的生物信息学与基因组分析
Antibiotics (Basel). 2022 Aug 31;11(9):1177. doi: 10.3390/antibiotics11091177.
5
Precise tuning of bacterial translation initiation by non-equilibrium 5'-UTR unfolding observed in single mRNAs.在单个 mRNA 中观察到的非平衡 5'-UTR 展开对细菌翻译起始的精确调控。
Nucleic Acids Res. 2022 Aug 26;50(15):8818-8833. doi: 10.1093/nar/gkac635.
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Engineering Antisense Oligonucleotides as Antibacterial Agents That Target FMN Riboswitches and Inhibit the Growth of , , and .工程化反义寡核苷酸作为靶向 FMN 核糖开关的抗菌剂,抑制 、 、 和 的生长。
ACS Synth Biol. 2022 May 20;11(5):1845-1855. doi: 10.1021/acssynbio.2c00013. Epub 2022 Apr 20.
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