College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
University Key Laboratory of Forest Stress Physiology, Ecology and Molecular Biology of Fujian Province, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Int J Mol Sci. 2023 Jun 19;24(12):10342. doi: 10.3390/ijms241210342.
GATA transcription factors are crucial proteins in regulating transcription and are characterized by a type-IV zinc finger DNA-binding domain. They play a significant role in the growth and development of plants. While the family gene has been identified in several plant species, it has not yet been reported in . In this study, 22 family genes were identified from the genome, and their physicochemical properties, chromosomal distribution, subcellular localization, phylogenetic tree, conserved motif, gene structure, cis-regulatory elements in promoters, and expression in plant tissues were analyzed. Phylogenetic analysis showed that the were clearly divided into four subfamilies. They are unequally distributed across 11 out of 12 chromosomes, except chromosome 9. Promoter cis-elements are mostly involved in environmental stress and hormonal regulation. Further studies showed that was localized to chloroplasts and expressed in five tissues, including the root bark, root xylem, stem bark, stem xylem, and leaf, which means that may have a potential role in the regulation of chlorophyll synthesis. Finally, the expression profiles of four representative genes, , , , and , under drought, salinity, and temperature stress, were detected by qRT-PCR. The results showed that , and were significantly expressed under drought stress. and were significantly expressed after 8 h of low-temperature stress at 10 °C. This study concludes that the growth and development of the family gene in in coping with adversity stress are crucial. This study provides new ideas for studying the evolution of GATAs, provides useful information for future functional analysis of genes, and helps better understand the abiotic stress response of .
GATA 转录因子是调节转录的关键蛋白,其特征是具有 IV 型锌指 DNA 结合结构域。它们在植物的生长和发育中起着重要作用。虽然在几种植物物种中已经鉴定出 家族基因,但在 中尚未报道。在这项研究中,从 基因组中鉴定出 22 个 家族基因,并对它们的理化性质、染色体分布、亚细胞定位、系统发育树、保守基序、基因结构、启动子中的顺式调控元件以及在植物组织中的表达进行了分析。系统发育分析表明, 被明显分为四个亚家族。它们不均匀地分布在 12 条染色体中的 11 条上,除了 9 号染色体。启动子顺式元件主要涉及环境胁迫和激素调节。进一步的研究表明, 定位于叶绿体,并在包括根皮、根木质部、茎皮、茎木质部和叶片在内的五个组织中表达,这意味着 可能在叶绿素合成的调控中发挥潜在作用。最后,通过 qRT-PCR 检测了四个代表性基因 、 、 、和 在干旱、盐度和温度胁迫下的表达谱。结果表明, 、 和 在干旱胁迫下显著表达。 、 低温胁迫 8 h 后在 10°C 下表达显著。本研究表明, 家族基因在 中对逆境胁迫的生长发育至关重要。本研究为研究 GATAs 的进化提供了新的思路,为未来 基因的功能分析提供了有用的信息,并有助于更好地理解 的非生物胁迫反应。