Qiao Jie, Chen Yingying, Ge Haoyu, Xu Hao, Guo Xiaobing, Liu Ruishan, Li Chenyu, Chen Ruyan, Gou Jianjun, Chen Mantao, Zheng Beiwen
State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China.
Department of Laboratory Medicine, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Front Microbiol. 2023 Jun 12;14:1074612. doi: 10.3389/fmicb.2023.1074612. eCollection 2023.
To explore the genetic characteristics of the IMP-4, NDM-1, OXA-1, and KPC-2 co-producing multidrug-resistant (MDR) clinical isolate, wang9.
MALDI-TOF MS was used for species identification. PCR and Sanger sequencing analysis were used to identify resistance genes. In addition to agar dilution, broth microdilution was used for antimicrobial susceptibility testing (AST). We performed whole genome sequencing (WGS) of the strains and analyzed the resulting data for drug resistance genes and plasmids. Phylogenetic trees were constructed with maximum likelihood, plotted using MAGA X, and decorated by iTOL.
carrying , , , and are resistant to most antibiotics, intermediate to tigecycline, and only sensitive to polymyxin B, amikacin, and fosfomycin. The coexists with the and the on a novel transferable plasmid variant pwang9-1, located on the integron In, transposon Tn, and integron In, respectively. The gene cassette sequence of integron In is , while the gene cassette sequence of In is The is located on the transposon Tn, and its sequence is ISISISIS The is located on the transposon Tn of plasmid pwang9-1, and its sequence is ISIS Phylogenetic analysis showed that most of the 34\u00B0 isolates from China were divided into three clusters. Among them, wang1 and wang9 belong to the same cluster as two strains of from environmental samples from Zhejiang.
We found carrying , , , and for the first time, and conducted in-depth research on its drug resistance mechanism, molecular transfer mechanism and epidemiology. In particular, we found that , , and coexisted on a new transferable hybrid plasmid that carried many drug resistance genes and insertion sequences. The plasmid may capture more resistance genes, raising our concern about the emergence of new resistance strains.
探究产IMP-4、NDM-1、OXA-1和KPC-2的多重耐药(MDR)临床分离株wang9的遗传特征。
采用基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)进行菌种鉴定。采用聚合酶链反应(PCR)和桑格测序分析鉴定耐药基因。除琼脂稀释法外,还采用肉汤微量稀释法进行抗菌药物敏感性试验(AST)。我们对菌株进行了全基因组测序(WGS),并分析所得数据中的耐药基因和质粒。使用最大似然法构建系统发育树,用MAGA X绘制,并由iTOL进行修饰。
携带IMP-4、NDM-1、OXA-1和KPC-2的wang9对大多数抗生素耐药,对替加环素中介,仅对多粘菌素B、阿米卡星和磷霉素敏感。IMP-4与NDM-1和OXA-1分别存在于一个新型可转移质粒变体pwang9-1上,该质粒位于整合子In53、转座子Tn125和整合子In10上。整合子In53的基因盒序列为5′-aadA2-sat2-dfrA12-orfF-aadA1-3′,而In10的基因盒序列为5′-dfrA17-aadA5-3′。KPC-2位于转座子Tn4401上,其序列为IS26-orf4-aacA4-catB3-IS26。NDM-1位于质粒pwang9-1的转座子Tn125上,其序列为ISAba125。系统发育分析表明,来自中国的34株鲍曼不动杆菌分离株大多分为三个簇。其中,wang1和wang9与来自浙江环境样本的两株鲍曼不动杆菌属于同一簇。
我们首次发现携带IMP-4、NDM-1、OXA-1和KPC-2的鲍曼不动杆菌,并对其耐药机制分子转移机制和流行病学进行了深入研究。特别是,我们发现IMP-4、NDM-1和OXA-1共存于一个携带许多耐药基因和插入序列的新型可转移杂交质粒上。该质粒可能捕获更多耐药基因,这引发了我们对新耐药菌株出现的担忧。