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基于生物标志物激活图的可解释糖尿病视网膜病变诊断。

Interpretable Diabetic Retinopathy Diagnosis Based on Biomarker Activation Map.

出版信息

IEEE Trans Biomed Eng. 2024 Jan;71(1):14-25. doi: 10.1109/TBME.2023.3290541. Epub 2023 Dec 22.

DOI:10.1109/TBME.2023.3290541
PMID:37405891
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10796196/
Abstract

OBJECTIVE

Deep learning classifiers provide the most accurate means of automatically diagnosing diabetic retinopathy (DR) based on optical coherence tomography (OCT) and its angiography (OCTA). The power of these models is attributable in part to the inclusion of hidden layers that provide the complexity required to achieve a desired task. However, hidden layers also render algorithm outputs difficult to interpret. Here we introduce a novel biomarker activation map (BAM) framework based on generative adversarial learning that allows clinicians to verify and understand classifiers' decision-making.

METHODS

A data set including 456 macular scans were graded as non-referable or referable DR based on current clinical standards. A DR classifier that was used to evaluate our BAM was first trained based on this data set. The BAM generation framework was designed by combing two U-shaped generators to provide meaningful interpretability to this classifier. The main generator was trained to take referable scans as input and produce an output that would be classified by the classifier as non-referable. The BAM is then constructed as the difference image between the output and input of the main generator. To ensure that the BAM only highlights classifier-utilized biomarkers an assistant generator was trained to do the opposite, producing scans that would be classified as referable by the classifier from non-referable scans.

RESULTS

The generated BAMs highlighted known pathologic features including nonperfusion area and retinal fluid.

CONCLUSION/SIGNIFICANCE: A fully interpretable classifier based on these highlights could help clinicians better utilize and verify automated DR diagnosis.

摘要

目的

基于光学相干断层扫描(OCT)及其血管造影(OCTA),深度学习分类器为自动诊断糖尿病视网膜病变(DR)提供了最准确的方法。这些模型的强大功能部分归因于隐藏层的包含,这些隐藏层提供了实现预期任务所需的复杂性。然而,隐藏层也使得算法输出难以解释。在这里,我们引入了一种基于生成对抗学习的新生物标志物激活图(BAM)框架,该框架允许临床医生验证和理解分类器的决策。

方法

一个包含 456 个黄斑扫描的数据集根据当前临床标准被评为非可转诊或可转诊 DR。首先基于该数据集训练用于评估我们 BAM 的 DR 分类器。BAM 生成框架通过结合两个 U 形生成器来设计,为该分类器提供有意义的可解释性。主生成器被训练为以可转诊扫描为输入,并生成输出,该输出将被分类器分类为不可转诊。然后,BAM 构造为主生成器的输出和输入之间的差异图像。为了确保 BAM 仅突出显示分类器使用的生物标志物,训练了一个辅助生成器来执行相反的操作,从不可转诊的扫描中生成可被分类器分类为可转诊的扫描。

结果

生成的 BAM 突出显示了已知的病理特征,包括无灌注区和视网膜积液。

结论/意义:基于这些亮点的完全可解释分类器可以帮助临床医生更好地利用和验证自动 DR 诊断。

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