Department of Biomolecular Sciences (DiSB), University of Urbino Carlo Bo, 61029 Urbino, Italy.
Department of Pure and Applied Sciences (DiSPeA), University of Urbino Carlo Bo, 61029 Urbino, Italy.
Nutrients. 2023 Apr 28;15(9):2132. doi: 10.3390/nu15092132.
In our previous studies, fruit (PSF) ethanol extract was showed to exert antioxidant, antimicrobial, anti-inflammatory and wound healing activities. In the present study, an integrated bioinformatics analysis combined with experimental validation was carried out to investigate the biological mechanism(s) that are responsible for the reported PSF beneficial effects as an antioxidant during a pro-inflammatory TLR4 insult. Bioinformatics analysis using miRNet 2.0 was carried out to address which biological process(es) the extract could be involved in. In addition, Chemprop was employed to identify the key targets of nuclear receptor (NR) signaling and stress response (SR) pathways potentially modulated. The miRNet analysis suggested that the PSF extract mostly activates the biological process of cellular senescence. The Chemprop analysis predicted three possible targets for nine phytochemicals found in the extract: (i) ARE signaling, (ii) mitochondrial membrane potential (MMP) and (iii) p53 SR pathways. The PSF extract antioxidant effect was also experimentally validated in vitro using the human monocyte U937 cell line. Our findings showed that Nrf2 is modulated by the extract with a consequent reduction of the oxidative stress level. This was confirmed by a strong decrease in the amount of reactive oxygen species (ROS) observed in the PSF-treated cells subjected to lipopolysaccharide (LPS) (6 h treatment, 1 µg/mL). No visible effects were observed on p53 and MMP modulation.
在我们之前的研究中,水果(PSF)乙醇提取物表现出抗氧化、抗菌、抗炎和伤口愈合活性。在本研究中,进行了综合的生物信息学分析结合实验验证,以研究 PSF 作为抗氧化剂在促炎 TLR4 损伤中发挥有益作用的生物学机制。使用 miRNet 2.0 进行生物信息学分析,以确定提取物可能涉及的哪些生物学过程。此外,使用 Chemprop 来鉴定潜在调节的核受体 (NR) 信号和应激反应 (SR) 途径的关键靶标。miRNet 分析表明,PSF 提取物主要激活细胞衰老的生物学过程。Chemprop 分析预测了提取物中发现的九种植物化学物质的三个可能的靶标:(i)ARE 信号,(ii)线粒体膜电位 (MMP) 和 (iii) p53 SR 途径。PSF 提取物的抗氧化作用也在体外使用人单核细胞 U937 细胞系进行了实验验证。我们的研究结果表明,Nrf2 被提取物调节,从而降低了氧化应激水平。这在 LPS(6 小时处理,1μg/mL)处理的 PSF 处理细胞中观察到活性氧 (ROS) 数量明显减少得到证实。在 p53 和 MMP 调节方面没有观察到明显的影响。