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通过巢式PCR对牛进行分子鉴定。

Molecular identification of in cattle by nested PCR.

作者信息

Al-Saadi Mohammed, Al-Sallami Dhama, Alsultan Amjed

机构信息

Department of Internal and Preventive Medicine, College of Veterinary Medicine, University of Al-Qadisiyah, Al-Diwaniyah, Iraq.

Department of Physiology, Pharmacology and Biochemistry, College of Veterinary Medicine, University of Al-Qadisiyah, Al-Diwaniyah, Iraq.

出版信息

Iran J Microbiol. 2023 Jun;15(3):433-438. doi: 10.18502/ijm.v15i3.12904.

DOI:10.18502/ijm.v15i3.12904
PMID:37448679
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10336285/
Abstract

BACKGROUND AND OBJECTIVES

Anaplasmosis is a zoonotic disease caused by Gram-negative bacterium from Anaplasmataceae family. Anaplasma causes high economic losses worldwide. 16S rRNA analysis was used to diagnose in Cattle. Phylogenetic tree and estimation of evolutionary divergence between isolates were performed.

MATERIALS AND METHODS

A total of 60 blood samples were collected from a cattle farm in AL-Diwaniyah province. 16S rRNA gene was identified using nested PCR. Overall, 40% of cattle that were chosen to collect the blood were identified to be infected with

RESULTS

The results have shown presence of targeting partial region of 16S rRNA gene in 24 samples out of 60. Sequencing results of 10 samples have revealed that the phylogenetic tree was divided in to two separate clades. Five isolates of -Iraq (accession no. OP646782, OP646783, OP646784, OP646790, and OP646791) were located in one clade with the -China (accession no. MN193068.1). While, five isolates (accession no. OP646785, OP646786, OP646787, OP646788, OP646789) were in different clade with two isolates of -Africa and -Zambia in distinct branches, close to the Rickettsiales.

CONCLUSION

The phylogenetic study of sequences indicated that the isolates were collected from a cattle farm in Al-Dewaniyah were similar and close related to -China, -Zambia and -Africa). This study suggests that cattle can be considered a reservoir of .

摘要

背景与目的

无形体病是一种由无形体科革兰氏阴性菌引起的人畜共患病。无形体在全球范围内造成巨大经济损失。16S rRNA分析用于牛无形体病的诊断,并构建了分离株之间的系统发育树及进化分歧估计。

材料与方法

从迪瓦尼耶省的一个养牛场采集了60份血样。采用巢式PCR鉴定16S rRNA基因。总体而言,所选采集血样的牛中有40%被鉴定感染……

结果

结果显示,60份样本中有24份存在16S rRNA基因部分区域的靶向条带。10份样本的测序结果表明,系统发育树分为两个独立的分支。伊拉克的5个分离株(登录号OP646782、OP646783、OP646784、OP646790和OP646791)与中国的分离株(登录号MN193068.1)位于一个分支。而另外5个分离株(登录号OP646785、OP646786、OP646787、OP646788、OP646789)与非洲和赞比亚的两个分离株位于不同分支,靠近立克次氏体目,在不同的分支上。

结论

对……序列的系统发育研究表明,从迪瓦尼耶一个养牛场采集的分离株与中国、赞比亚和非洲的……相似且密切相关。本研究表明,牛可被视为……的宿主。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd2c/10336285/2f9c8f74efbe/IJM-15-433-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd2c/10336285/173c5148a039/IJM-15-433-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd2c/10336285/2f9c8f74efbe/IJM-15-433-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd2c/10336285/173c5148a039/IJM-15-433-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd2c/10336285/2f9c8f74efbe/IJM-15-433-g002.jpg

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