Artificial Intelligence Center for Health and Biomedical Research, National Institutes of Biomedical Innovation, Health and Nutrition, Settsu, Osaka 566-0002, Japan.
Laboratory for Computational Biology, Institute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan.
J Med Chem. 2023 Jul 27;66(14):9697-9709. doi: 10.1021/acs.jmedchem.3c00481. Epub 2023 Jul 14.
We developed a novel drug metabolism and pharmacokinetics (DMPK) analysis platform named DruMAP. This platform consists of a database for DMPK parameters and programs that can predict many DMPK parameters based on the chemical structure of a compound. The DruMAP database includes curated DMPK parameters from public sources and in-house experimental data obtained under standardized conditions; it also stores predicted DMPK parameters produced by our prediction programs. Users can predict several DMPK parameters simultaneously for novel compounds not found in the database. Furthermore, the highly flexible search system enables users to search for compounds as they desire. The current version of DruMAP comprises more than 30,000 chemical compounds, about 40,000 activity values (collected from public databases and in-house data), and about 600,000 predicted values. Our platform provides a simple tool for searching and predicting DMPK parameters and is expected to contribute to the acceleration of new drug development. DruMAP can be freely accessed at: https://drumap.nibiohn.go.jp/.
我们开发了一种名为 DruMAP 的新型药物代谢动力学(DMPK)分析平台。该平台由一个 DMPK 参数数据库和可以根据化合物化学结构预测许多 DMPK 参数的程序组成。DruMAP 数据库包括来自公共资源的经过精心整理的 DMPK 参数和在标准化条件下获得的内部实验数据;它还存储了我们的预测程序生成的预测 DMPK 参数。用户可以同时预测数据库中未找到的新化合物的几个 DMPK 参数。此外,高度灵活的搜索系统使用户能够按照自己的意愿搜索化合物。DruMAP 的当前版本包含超过 30000 种化学化合物、约 40000 个活性值(从公共数据库和内部数据收集)和约 600000 个预测值。我们的平台提供了一个用于搜索和预测 DMPK 参数的简单工具,有望为新药开发的加速做出贡献。DruMAP 可在以下网址免费访问:https://drumap.nibiohn.go.jp/。