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基于 NAxtra 磁珠的快速、低成本、稳健且高通量的病毒核酸分离方法。

A fast, low-cost, robust and high-throughput method for viral nucleic acid isolation based on NAxtra magnetic nanoparticles.

机构信息

Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway.

Department of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.

出版信息

Sci Rep. 2023 Jul 20;13(1):11714. doi: 10.1038/s41598-023-38743-0.

DOI:10.1038/s41598-023-38743-0
PMID:37474666
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10359305/
Abstract

The year of 2020 was profoundly marked by a global pandemic caused by a strain of coronavirus named severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the etiological agent of coronavirus disease 2019 (COVID-19). To control disease spread, a key strategy adopted by many countries was the regular testing of individuals for infection. This led to the rapid development of diagnostic testing technologies. In Norway, within a week, our group developed a test kit to quickly isolate viral RNA and safely detect SARS-CoV-2 infection with sensitivity comparable to available kits. Herein, the procedure employed for the detection of SARS-CoV-2 in swab samples from patients using the NTNU-COVID-19 test kit is described in detail. This procedure, based on NAxtra magnetic nanoparticles and an optimized nucleic acid extraction procedure, is robust, reliable, and straightforward, providing high-quality nucleic acids within 14 min. The NAxtra protocol is adaptable and was further validated for extraction of DNA and RNA from other types of viruses. A comparison of the protocol on different liquid handling systems is also presented. Due to the simplicity and low cost of this method, implementation of this technology to diagnose virus infections on a clinical setting would benefit health care systems, promoting sustainability.

摘要

2020 年,一种名为严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)的冠状病毒引起的全球大流行给世界带来了深刻影响,该病毒是 2019 年冠状病毒病(COVID-19)的病原体。为了控制疾病传播,许多国家采取的一个关键策略是定期对个体进行感染检测。这导致了诊断检测技术的快速发展。在挪威,我们的团队在一周内开发了一种试剂盒,能够快速分离病毒 RNA,并安全、灵敏地检测 SARS-CoV-2 感染,其灵敏度与现有试剂盒相当。本文详细描述了使用 NTNU-COVID-19 检测试剂盒从患者拭子样本中检测 SARS-CoV-2 的过程。该方法基于 NAxtra 磁性纳米颗粒和优化的核酸提取程序,具有强大、可靠和简单的特点,可在 14 分钟内提供高质量的核酸。NAxtra 方案具有适应性,并进一步验证了从其他类型病毒中提取 DNA 和 RNA 的方法。还展示了不同液体处理系统上该方案的比较。由于该方法简单且成本低,如果在临床环境中实施该技术来诊断病毒感染,将有益于医疗保健系统,促进可持续性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/7ca0ac2de906/41598_2023_38743_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/589c6c9df32b/41598_2023_38743_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/4c42efc85e42/41598_2023_38743_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/b0d02ac30bed/41598_2023_38743_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/e1c892f50c97/41598_2023_38743_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/7ca0ac2de906/41598_2023_38743_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/589c6c9df32b/41598_2023_38743_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/4c42efc85e42/41598_2023_38743_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/b0d02ac30bed/41598_2023_38743_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/e1c892f50c97/41598_2023_38743_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c74f/10359305/7ca0ac2de906/41598_2023_38743_Fig5_HTML.jpg

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