Thulasi Seetha Sithin, Garanzini Enrico, Tenconi Chiara, Marenghi Cristina, Avuzzi Barbara, Catanzaro Mario, Stagni Silvia, Villa Sergio, Chiorda Barbara Noris, Badenchini Fabio, Bertocchi Elena, Sanduleanu Sebastian, Pignoli Emanuele, Procopio Giuseppe, Valdagni Riccardo, Rancati Tiziana, Nicolai Nicola, Messina Antonella
Prostate Cancer Program, Fondazione IRCCS Istituto Nazionale dei Tumori, 20133 Milan, Italy.
Department of Precision Medicine, GROW-School for Oncology and Developmental Biology, Maastricht University, 6211 LK Maastricht, The Netherlands.
J Pers Med. 2023 Jul 22;13(7):1172. doi: 10.3390/jpm13071172.
Stability analysis remains a fundamental step in developing a successful imaging biomarker to personalize oncological strategies. This study proposes an in silico contour generation method for simulating segmentation variations to identify stable radiomic features. Ground-truth annotation provided for the whole prostate gland on the multi-parametric MRI sequences (T2w, ADC, and SUB-DCE) were perturbed to mimic segmentation differences observed among human annotators. In total, we generated 15 synthetic contours for a given image-segmentation pair. One thousand two hundred twenty-four unfiltered/filtered radiomic features were extracted applying Pyradiomics, followed by stability assessment using ICC(1,1). Stable features identified in the internal population were then compared with an external population to discover and report robust features. Finally, we also investigated the impact of a wide range of filtering strategies on the stability of features. The percentage of unfiltered (filtered) features that remained robust subjected to segmentation variations were T2w-36% (81%), ADC-36% (94%), and SUB-43% (93%). Our findings suggest that segmentation variations can significantly impact radiomic feature stability but can be mitigated by including pre-filtering strategies as part of the feature extraction pipeline.
稳定性分析仍然是开发成功的成像生物标志物以实现肿瘤治疗策略个性化的基本步骤。本研究提出了一种基于计算机模拟轮廓生成的方法,用于模拟分割变化以识别稳定的放射组学特征。在多参数MRI序列(T2加权成像、表观扩散系数成像和减法动态对比增强成像)上为整个前列腺提供的真实标注被扰动,以模拟人类标注者之间观察到的分割差异。对于给定的图像-分割对,我们总共生成了15个合成轮廓。应用Pyradiomics提取了1224个未过滤/过滤后的放射组学特征,随后使用组内相关系数(ICC(1,1))进行稳定性评估。然后将在内部群体中识别出的稳定特征与外部群体进行比较,以发现并报告稳健的特征。最后,我们还研究了广泛的过滤策略对特征稳定性的影响。在分割变化下仍保持稳健的未过滤(过滤后)特征的百分比分别为:T2加权成像-36%(81%)、表观扩散系数成像-36%(94%)和减法动态对比增强成像-43%(93%)。我们的研究结果表明,分割变化会显著影响放射组学特征的稳定性,但可以通过将预过滤策略纳入特征提取流程来减轻这种影响。