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机器学习在前列腺癌主动监测进展预测中的应用。

A machine learning approach to predict progression on active surveillance for prostate cancer.

机构信息

Department of Urology, Massachusetts General Hospital, Boston, Massachusetts.

Department of Urology, Massachusetts General Hospital, Boston, Massachusetts; Broad Institute of Harvard and MIT, Cambridge, Massachusetts.

出版信息

Urol Oncol. 2022 Apr;40(4):161.e1-161.e7. doi: 10.1016/j.urolonc.2021.08.007. Epub 2021 Aug 29.

Abstract

PURPOSE

Robust prediction of progression on active surveillance (AS) for prostate cancer can allow for risk-adapted protocols. To date, models predicting progression on AS have invariably used traditional statistical approaches. We sought to evaluate whether a machine learning (ML) approach could improve prediction of progression on AS.

PATIENTS AND METHODS

We performed a retrospective cohort study of patients diagnosed with very-low or low-risk prostate cancer between 1997 and 2016 and managed with AS at our institution. In the training set, we trained a traditional logistic regression (T-LR) classifier, and alternate ML classifiers (support vector machine, random forest, a fully connected artificial neural network, and ML-LR) to predict grade-progression. We evaluated model performance in the test set. The primary performance metric was the F1 score.

RESULTS

Our cohort included 790 patients. With a median follow-up of 6.29 years, 234 developed grade-progression. In descending order, the F1 scores were: support vector machine 0.586 (95% CI 0.579 - 0.591), ML-LR 0.522 (95% CI 0.513 - 0.526), artificial neural network 0.392 (95% CI 0.379 - 0.396), random forest 0.376 (95% CI 0.364 - 0.380), and T-LR 0.182 (95% CI 0.151 - 0.185). All alternate ML models had a significantly higher F1 score than the T-LR model (all p <0.001).

CONCLUSION

In our study, ML methods significantly outperformed T-LR in predicting progression on AS for prostate cancer. While our specific models require further validation, we anticipate that a ML approach will help produce robust prediction models that will facilitate individualized risk-stratification in prostate cancer AS.

摘要

目的

对前列腺癌主动监测(AS)进展进行稳健预测,可以实现风险适应型方案。迄今为止,预测 AS 进展的模型无一例外地使用了传统的统计方法。我们试图评估机器学习(ML)方法是否可以提高 AS 进展的预测能力。

患者和方法

我们对 1997 年至 2016 年间在我们机构接受 AS 管理的极低危或低危前列腺癌患者进行了回顾性队列研究。在训练集中,我们训练了一个传统逻辑回归(T-LR)分类器,以及替代的 ML 分类器(支持向量机、随机森林、全连接人工神经网络和 ML-LR)来预测分级进展。我们在测试集中评估了模型性能。主要性能指标是 F1 分数。

结果

我们的队列包括 790 名患者。中位随访时间为 6.29 年,234 名患者发生分级进展。按降序排列,F1 分数分别为:支持向量机 0.586(95%CI 0.579-0.591)、ML-LR 0.522(95%CI 0.513-0.526)、人工神经网络 0.392(95%CI 0.379-0.396)、随机森林 0.376(95%CI 0.364-0.380)和 T-LR 0.182(95%CI 0.151-0.185)。所有替代 ML 模型的 F1 评分均显著高于 T-LR 模型(均 P<0.001)。

结论

在我们的研究中,ML 方法在预测前列腺癌 AS 进展方面明显优于 T-LR。虽然我们的特定模型需要进一步验证,但我们预计 ML 方法将有助于生成稳健的预测模型,从而促进前列腺癌 AS 的个体化风险分层。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f7d/8882704/53d42b152bcb/nihms-1753258-f0001.jpg

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