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一套用于核酸和蛋白质分析的程序，用FORTRAN 77编写，适用于与IBM-PC兼容的微型计算机。

A collection of programs for nucleic acid and protein analysis, written in FORTRAN 77 for IBM-PC compatible microcomputers.

作者信息

Lang B F, Burger G

出版信息

Nucleic Acids Res. 1986 Jan 10;14(1):455-65. doi: 10.1093/nar/14.1.455.

DOI:10.1093/nar/14.1.455
PMID:3753781
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC339430/
Abstract

We have developed a collection of programs for manipulation and analysis of nucleotide and protein sequences. The package was written in Fortran 77 on a Sirius1/Victor microcomputer which can be easily implemented on a large variety of other computers. Some of the programs have already been adapted for use on a Vax 11. Our aim was to develop programs consisting of small, comprehensible and well documented units that have very fast execution times and are comfortably interactive. The package is therefore suitable for individual modifications, even with little understanding of computer languages.

摘要

我们已经开发了一系列用于核苷酸和蛋白质序列操作与分析的程序。该软件包是用Fortran 77语言在Sirius1/Victor微型计算机上编写的，很容易在其他各种计算机上实现。其中一些程序已经被改编用于Vax 11计算机。我们的目标是开发由小型、易于理解且文档完善的单元组成的程序，这些程序执行速度非常快且具有良好的交互性。因此，即使对计算机语言了解甚少，该软件包也适合进行个性化修改。

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本文引用的文献

1
A simple method for displaying the hydropathic character of a protein.一种展示蛋白质亲水性特征的简单方法。
J Mol Biol. 1982 May 5;157(1):105-32. doi: 10.1016/0022-2836(82)90515-0.
2
Microcomputer programs for back translation of protein to DNA sequences and analysis of ambiguous DNA sequences.用于将蛋白质反向翻译为DNA序列以及分析模糊DNA序列的微机程序。
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):819-23. doi: 10.1093/nar/12.1part2.819.
3
A comprehensive set of sequence analysis programs for the VAX.一套适用于VAX的综合序列分析程序。
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95. doi: 10.1093/nar/12.1part1.387.
4
Assembly of the mitochondrial membrane system. DNA sequence and organization of the cytochrome b gene in Saccharomyces cerevisiae D273-10B.线粒体膜系统的组装。酿酒酵母D273 - 10B中细胞色素b基因的DNA序列及组织形式。
J Biol Chem. 1980 Oct 25;255(20):9828-37.
5
Analysis of large nucleic acid dot matrices on small computers.小型计算机上的大型核酸点阵分析
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):767-76. doi: 10.1093/nar/12.1part2.767.
6
Some simple computational methods to improve the folding of large RNAs.一些改善大型RNA折叠的简单计算方法。
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):45-52. doi: 10.1093/nar/12.1part1.45.
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The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans.裂殖酵母粟酒裂殖酵母的线粒体基因组：高度同源的内含子插入到粟酒裂殖酵母和构巢曲霉中原本保守性较低的cox1基因的相同位置。
EMBO J. 1984 Sep;3(9):2129-36. doi: 10.1002/j.1460-2075.1984.tb02102.x.
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Globin mRNA sequences: analysis of base pairing and evolutionary implications.珠蛋白mRNA序列：碱基配对分析及其进化意义
Cold Spring Harb Symp Quant Biol. 1978;42 Pt 2:985-1002. doi: 10.1101/sqb.1978.042.01.099.