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蛋白质组和转录组的比较分析揭示了不同子实体发育阶段的发育和营养分子机制。

Comparative analysis of proteomes and transcriptomes revealed the molecular mechanism of development and nutrition of at different fruiting body development stages.

作者信息

Yu Hailong, Jiang Ning, Yan Miaomiao, Cheng Xuan, Zhang Lujun, Zhai Dandan, Liu Jianyu, Zhang Meiyan, Song Chunyan, Yu Hao, Li Qiaozhen

机构信息

National Engineering Research Center of Edible Fungi, Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, Shanghai, China.

Shandong Provincial Key Laboratory of Applied Mycology, School of Life Sciences, Qingdao Agricultural University, Qingdao, Shandong, China.

出版信息

Front Nutr. 2023 Jul 21;10:1197983. doi: 10.3389/fnut.2023.1197983. eCollection 2023.

Abstract

is a commercially cultivated high-temperature mushroom. Investigating the molecular mechanism of fruiting body development will help us to better understand the regulation of substrates and energy in this process. However, little information has been reported on the development and nutrients of the fruiting body. In the present study, is cultivated in a climate chamber, and comparative transcriptome, proteome, and nutritional analysis of fruiting bodies were performed. Our results revealed that Cytochrome P450 monooxygenases and hydrophobin proteins play important roles during the differentiation in the elongation stage. Later, carbon metabolism dominate the fruiting body metabolism and genes related to the carbohydrate metabolic process, glycolytic process, and gluconeogenesis were up-regulated in the mature fruiting bodies. The up-regulation of carbohydrate substrates utilization CAZymes genes and inconsistent protein expression in pileus indicated a reverse transportation of mRNA from the fruiting body to vegetative mycelia. In addition, protein concentration in the pileus is higher than that in the stem, while the stem is the major nitrogen metabolic and amino acid synthetic location. The integrated transcriptomic, proteomic, and nutritional analysis indicated a two-way transportation of substrates and mRNAs in . Stem synthesizes amino acids and transported them to pileus with reducing sugars, while pileus induces the expression of substrate degradation mRNA according to the needs of growth and development and transports them in the other direction.

摘要

是一种商业化栽培的高温蘑菇。研究子实体发育的分子机制将有助于我们更好地理解这一过程中底物和能量的调控。然而,关于子实体发育和营养的信息报道较少。在本研究中,在气候箱中栽培,并对子实体进行了比较转录组、蛋白质组和营养分析。我们的结果表明,细胞色素P450单加氧酶和疏水蛋白在伸长阶段的分化过程中起重要作用。后来,碳代谢主导子实体代谢,与碳水化合物代谢过程、糖酵解过程和糖异生相关的基因在成熟子实体中上调。菌盖中碳水化合物底物利用CAZymes基因的上调和蛋白质表达的不一致表明mRNA从子实体向营养菌丝体的反向运输。此外,菌盖中的蛋白质浓度高于菌柄,而菌柄是主要的氮代谢和氨基酸合成部位。综合转录组学、蛋白质组学和营养分析表明,在[蘑菇名称]中底物和mRNA存在双向运输。菌柄合成氨基酸并将其与还原糖一起运输到菌盖,而菌盖根据生长发育需要诱导底物降解mRNA的表达并向相反方向运输。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3501/10402744/47e59feecc64/fnut-10-1197983-g001.jpg

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