Division of Agricultural Bioinformatics, ICAR-Indian Agricultural Statistics Research Institute, New Delhi, 110012, India.
Division of Agricultural Bioinformatics, ICAR-Indian Agricultural Statistics Research Institute, New Delhi, 110012, India.
Plant Physiol Biochem. 2023 Sep;202:107933. doi: 10.1016/j.plaphy.2023.107933. Epub 2023 Aug 2.
One of the key enigmas in conventional and modern crop improvement programmes is how to introduce beneficial traits without any penalty impairment. Rice (Oryza sativa L.), among the essential staple food crops grown and utilized worldwide, needs to improve genotypes in multifaceted ways. With the global view to feed ten billion under the climatic perturbation, only a potent functional master regulator can withstand with hope for the next green revolution and food security. miRNAs are such, miniature, fine tuners for crop improvement and provide a value addition in emerging technologies, namely large-scale genotyping, phenotyping, genome editing, marker-assisted selection, and genomic selection, to make rice production feasible. There has been surplus research output generated since the last decade on miRNAs in rice, however, recent functional knowledge is limited to reaping the benefits for conventional and modern improvements in rice to avoid ambiguity and redundancy in the generated data. Here, we present the latest functional understanding of miRNAs in rice. In addition, their biogenesis, intra- and inter-kingdom signaling and communication, implication of amiRNAs, and consequences upon integration with CRISPR-Cas9. Further, highlights refer to the application of miRNAs for rice agronomical trait improvements, broadly classified into three functional domains. The majority of functionally established miRNAs are responsible for growth and development, followed by biotic and abiotic stresses. Tabular cataloguing reveals and highlights two multifaceted modules that were extensively studied. These belong to miRNA families 156 and 396, orchestrate multifarious aspects of advantageous agronomical traits. Moreover, updated and exhaustive functional aspects of different supplemental miRNA modules that would strengthen rice improvement are also being discussed.
在传统和现代作物改良计划中,一个关键的难题是如何在不造成任何不利损害的情况下引入有益性状。水稻(Oryza sativa L.)是全球广泛种植和利用的重要主食作物之一,需要以多种方式改良基因型。在全球范围内,要在气候波动下养活 100 亿人口,只有一个强大的功能主调控因子才能为下一次绿色革命和粮食安全带来希望。miRNAs 就是这样的微型精细调节器,为作物改良提供了附加值,并为新兴技术提供了价值,如大规模基因分型、表型分析、基因组编辑、标记辅助选择和基因组选择,使水稻生产成为可能。自上一个十年以来,关于水稻中的 miRNAs 已经产生了大量的研究成果,然而,最近的功能知识仅限于收获常规和现代改良的好处,以避免生成数据的歧义性和冗余性。在这里,我们介绍了水稻中 miRNAs 的最新功能理解。此外,还介绍了它们的生物发生、种间和种内信号传递和通讯、amiRNAs 的含义以及与 CRISPR-Cas9 整合的后果。此外,重点介绍了 miRNAs 在水稻农艺性状改良中的应用,大致分为三个功能领域。大多数功能已确定的 miRNAs 负责生长和发育,其次是生物和非生物胁迫。表格编目揭示并强调了两个广泛研究的多方面模块。这些模块属于 miRNA 家族 156 和 396,协调着有利农艺性状的多方面。此外,还讨论了不同补充 miRNA 模块的更新和详尽的功能方面,这些模块将加强水稻的改良。